Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g02006 ATGGGTGCCATCGTGGAGTGTTACCCGTCGTCGCGCACGGCGGTGCTTTCCCTCAACACGCTGCCGCTAGGATTCCGTTTCCGTCCCACCGATGAAGAGCTTATTGATTACTATCTCCGCTCGAAGATCAACGGGAATGGTGACGATGTTTGGGTTATCCGTGAAATTGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGACCGGAAGTATCCCAATGGGCACAGGTTGAACCGAGCTACGAACCATGGGTATTGGAAAGCAACGGGGAAGGATCGAAAGATTAAGTCTGGTTCCGCTTTGATTGGAATGAAGAAGACTCTTGTTTTCTATACTGGTCGTGCTCCGAAGGGAAAGAGGACCAATTGGGTTATGCATGAGTACAGGCCTACCCTGAAGGAGCTTGATGGTACCAATCCTGGACAGAATCCATATGTCCTTTGTCGCTTATTTAAGAAACACGATGAGAGTCTTGAAGGTTCACATGGTGATGATGTGGAGCGGACTGCTTCAACCCCTATGACTGCCAATCACTCTCCAGACGAAATACAATCTGATTCATCTCTCGATCCAGCATCTTCCTCACAGATTACTGAGGGTGAAAAGCCTCTAACAGTTATCCCTGAGAACTCTGAGGAAGCAATATCCAACATCATAACTCCAGTTGACTCCCGTAGTGACGGATGCGATGTTCTTGATGCACAAAATCAAATTGTAGAACTAGCTGCTGAGGATCGGCCATTTAATGTCCAGGACTTTTATGACACAACAAACCAGCAATTAGATGACAAATTATTCTCCCCAGTGCATGCTCATTTCCCACCGGAAATTTACTATCAATCAGAACTTCAGTATGGTACAAATGATAATATGTCTGACTTCTTTGACTCGGTTAATTGGGATGCGATCTCCTATGATACTAGCAGTCTAGAGCTATGCTCATCCTTCCTCAATGTCAAGGACAATGGATCTGGCAGTGACTCAGATGTGGACATGGCCAATATGACGAATCTGCAGGCGGTACATGGTTATCCTAAGGAGGCAGTTGAGCAGAAGAGCGATGTAGGATTATTTCAGAACAGTCCCCAGATAGCTTTCTCAAATGATGGTCCTATGGGCCAAGTGGACAATATGGTCGACAATTGTGGGCAACTAAGGAACTTTGATGCGTTTGCTAATGTTGATACTGGAATCAGAATTAGGTCTCGTCAAGGACGAAATGAACAGCCAAACATGAATGGATTGGTACAATCACAAGGTAATGCGCCAAGGAGAATACGATTAGTTGTTAGGCGTCCGAATGCGGCGGAGGAGACAGCAAAAGATGGAAGTTGTGCTTGTGCCCCAGAAGACCATAATTCAAAAACCATCATTACCAGGGAGAGGAAAGCTTCGGAAAACCATGCTGCTGGTGAGAATTCTGCTGTTACTAATGATGTGGATGAACCAGAGAAGGAATCTGACTTAGGAAAGACTACTCGGCAACATGTTGCAACTGCAGAATCCATGTCGAAAGACCATCTACAGAGTCGAAGGGGCCGCCACACCTCAAAGGTTTCGTCTAGCCGCGGCATGTGGTCTTATGTTGTTGCAGTTTCTGCAACTGTGTTGGTTTCAGTGATAGTGAGTGTTAATATATGGGCATATGTGAGATCTTAA 1713 0.4594 MGAIVECYPSSRTAVLSLNTLPLGFRFRPTDEELIDYYLRSKINGNGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSALIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKHDESLEGSHGDDVERTASTPMTANHSPDEIQSDSSLDPASSSQITEGEKPLTVIPENSEEAISNIITPVDSRSDGCDVLDAQNQIVELAAEDRPFNVQDFYDTTNQQLDDKLFSPVHAHFPPEIYYQSELQYGTNDNMSDFFDSVNWDAISYDTSSLELCSSFLNVKDNGSGSDSDVDMANMTNLQAVHGYPKEAVEQKSDVGLFQNSPQIAFSNDGPMGQVDNMVDNCGQLRNFDAFANVDTGIRIRSRQGRNEQPNMNGLVQSQGNAPRRIRLVVRRPNAAEETAKDGSCACAPEDHNSKTIITRERKASENHAAGENSAVTNDVDEPEKESDLGKTTRQHVATAESMSKDHLQSRRGRHTSKVSSSRGMWSYVVAVSATVLVSVIVSVNIWAYVRS* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g02006 570 Gene3D NAC domain 30 175 IPR036093 GO:0003677|GO:0006355
Lapu8g02006 570 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 253 - -
Lapu8g02006 570 SUPERFAMILY NAC domain 12 171 IPR036093 GO:0003677|GO:0006355
Lapu8g02006 570 MobiDBLite consensus disorder prediction 496 510 - -
Lapu8g02006 570 FunFam Nac domain-containing protein 86 30 174 - -
Lapu8g02006 570 MobiDBLite consensus disorder prediction 421 442 - -
Lapu8g02006 570 MobiDBLite consensus disorder prediction 186 219 - -
Lapu8g02006 570 MobiDBLite consensus disorder prediction 175 227 - -
Lapu8g02006 570 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Lapu8g02006 570 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Lapu8g02006 570 MobiDBLite consensus disorder prediction 479 538 - -
Lapu8g02006 570 MobiDBLite consensus disorder prediction 421 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g02006 Lapu-Chr8 37747388 37751654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g02006 14 494 NAC Transcription Factor Family AT4G35580 40.974 1.13e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g02006 NAM 5.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g02006 - - gmx:100778903 889.412