Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01995 ATGAAGAAAACACCACCCACCAAATTTCATCAATCTAGCCAAAGGAAACAGAATGCTAATCTCCAACATCTTGCTACAGCCAATGATGCAGAGAAGCACAATCTCAAGACCAGTTCTGCACTGAAATCTTTCAAGTATGCCGTGAAGAAATGTGCACAAGTTTTTTCATTGTTTCTCTATGGCAAAAGAAAATCAGTTTCATATGTTGTTGGAAATGATGACAGAAAAAATACATCTCAAGTCAGAGGGGTGGCATCATCATCAACTGATTTATCTTCGGAGAGTAACACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCCTACGCGTCATCTAGCACTGCAAGTGGACAACTTGGAATTGGCAACTTCTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGATAATGAAATTGGACAAGGTGGCTTTGGAACCGTCTACAAGGGAAAGCTTACTGATGGATCTATAGTTGCCGTAAAGCGCGCCAAGAAGGAAGTAATCCACAGTCACTTACATGAGTTCAAGAATGAAATATACACCTTGTCTCAAATTGAGCACCGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAAATGAGAAGATCATTGTTGTTGAATATGTTGGTAATGGTAACCTTCGAGAACACCTTGATGGGATTAGGGGAGAAGGATTAGAAATTGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTGCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCTTAATCACTGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCACGGCTGTCTGATGATCCTTCAGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTATCTTAGAACATATCAACTCACTGAAAAAAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGGTGACAGGAAGACATCCAATAGAACCAAAGAGACCCCTTGATGAAAGAGTGACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCAGCCTCCATCAAGGCAGTAAAACAGGTTCTCAAGCTAGCTCTCCAATGCCTTGCGCCTTTGAAACAATCACGGCCACCTATGAAGAATTGTGCAGAGGTTCTGTGGGAAATCCGCAAAAGATTTAGAGATGAAACCAATTCTGATCACCCTTCCCTTCCTTCTCATCATTCTGCAGATTTTCCTCAAAGGGAAAAGAATAAGCATACTATGTTTGGCATGGAAGATGATGACAGCTATAAATTTGTTTCTGTACCTAATCATATTCGTTCATAA 1395 0.3993 MKKTPPTKFHQSSQRKQNANLQHLATANDAEKHNLKTSSALKSFKYAVKKCAQVFSLFLYGKRKSVSYVVGNDDRKNTSQVRGVASSSTDLSSESNTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPDNEIGQGGFGTVYKGKLTDGSIVAVKRAKKEVIHSHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGNEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPSATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMVTGRHPIEPKRPLDERVTIRWAMKMLKQGDAVFAMDPRLRRNPASIKAVKQVLKLALQCLAPLKQSRPPMKNCAEVLWEIRKRFRDETNSDHPSLPSHHSADFPQREKNKHTMFGMEDDDSYKFVSVPNHIRS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01995 464 CDD STKc_IRAK 142 411 - -
Lapu8g01995 464 ProSiteProfiles Protein kinase domain profile. 136 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01995 464 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Lapu8g01995 464 Pfam Protein tyrosine and serine/threonine kinase 139 408 IPR001245 GO:0004672|GO:0006468
Lapu8g01995 464 SUPERFAMILY Protein kinase-like (PK-like) 117 411 IPR011009 -
Lapu8g01995 464 Gene3D Phosphorylase Kinase; domain 1 94 212 - -
Lapu8g01995 464 Gene3D Transferase(Phosphotransferase) domain 1 213 431 - -
Lapu8g01995 464 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 100 212 - -
Lapu8g01995 464 SMART serkin_6 136 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01995 464 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 213 422 - -
Lapu8g01995 464 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 109 429 - -
Lapu8g01995 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lapu8g01995 464 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01995 Lapu-Chr8 37591821 37595095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01995 108 411 Receptor kinase-like Gene Family AT1G79620 44.051 3.37e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lapu8g01995 PK_Tyr_Ser-Thr 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01995 - - gmx:100811511 802.357