Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01976 ATGCAAATGGAGACCCTCCCTCTCTTTCTCACTCTAACAGCAACTCTCTCAGCCTACCTCCTCTGGTTCCTCCTCCTCGCCCGAACCCTAACCGGTCCCAAACTCTTCCCCTTCCTCGGCAGCCTGCCGCCGCTCTTCCACAACCGCCACCGCGTCCATGACTGGATCGCTTCCAACCTACGCGCCGCCGGCTCCTCGGCCACCTATCAAACGTGCATCATCCCCCTCCCCTTCTTAGCGCGCAGGCAAGGGTTCTACACTGTCACGTGCCACCCCAAGAACCTCGAGCACGTCCTCCGCACGCGCTTCGACAACTACCCCAAGGGCCCCAGGTGGCACGCCGCCTTCCACGACCTCCTCGGTCACGGCATCTTCAACAGCGACGGCGACACCTGGCTCATGCAGCGCAAAACCGCCGCTCTCGAGTTCACCACACGCACTCTCAAACATGCCATGTCTCGCTGGGTTAACCGCTCCATCAAGAACCGCTTGTGGTGCATCTTGGACAAAGCGGCGAAAGATAACGTCTCCGTGGACTTACAAGACCTTCTTCTGCGCTTAACCTTCGATAATATCTGCGGACTCACCTTCGGTAAAGACCCCGAAACTCTTTCTCCCGAGCTTCCCGAAAACCCCTTCGCTGTTGCTTTTGACACCGCCACTGAAGCCACCATGGACAGGTTCCTCTACCCGGATCTGGTGTGGAGGTTCCAGAAGCTTCTGTGCATCGGATCCGAAAAAACGTTAAAGGAGAGTCTTCAAGTGGTGGAAACCTACATGAACGACGCCGTTGCGGATCGCAGGGAAACTCCCTCCGATGACTTGCTCTCGCGTTTCATGAAGAAGAGTGATGCCGCCGGCAACCCCTTCTCTGCGGCGGCGCTCCAGCGCATCGTCCTTAACTTCGTCCTCGCGGGCAGGGACACTTCATCGGTGGCCCTCACCTGGTTCTTCTGGCTCCTCATGAACCACCCTCACGTGGAGGAAAAAATCATGCACGAGATCACGACGGTTCTCTCCGATACGCGCGGCGTAGACCGCCGCCGATGGACGGAGGATCCCCTCGACTTCGGTGAGGCGGACCGGCTGGTGTACTTGAAGGCGGCGCTGGCCGAGACGCTGCGTCTGTACCCGTCGGTGCCGCAGGACTTCAAGCAGGCCATCGCCGACGATGTGTTGCCGGACGGTACTTTGGTTCCGGCGGGGTCGACGGTGACGTACTCGATATACTCAGCTGGGAGAGTGGAGACGATTTGGGGCGAGGATTGCATGGACTTTAAACCGGAGAGGTGGCTTTCGGTTCGCGGGGACCGGTTCGAACCGCCAAAAGATGGGTTCAAGTTCGTTGCTTTCAATGCTGGACCGAGAACCTGTTTGGGCAAGGACTTAGCTTACCTCCAGATGAAATCAGTGGCCGCCGCTGTGCTCTTGCGTTACCGGCTATCGCTGGTTCCCGGTCATCGAGTGGAGCAGAAGATGTCTCTCACTCTGTTCATGAAGAATGGGCTCAGAGTGTTCGTGCATCCACGTAAGCTTCATGGTGGGCCAGGGGTTCCCACGTAA 1563 0.5822 MQMETLPLFLTLTATLSAYLLWFLLLARTLTGPKLFPFLGSLPPLFHNRHRVHDWIASNLRAAGSSATYQTCIIPLPFLARRQGFYTVTCHPKNLEHVLRTRFDNYPKGPRWHAAFHDLLGHGIFNSDGDTWLMQRKTAALEFTTRTLKHAMSRWVNRSIKNRLWCILDKAAKDNVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFAVAFDTATEATMDRFLYPDLVWRFQKLLCIGSEKTLKESLQVVETYMNDAVADRRETPSDDLLSRFMKKSDAAGNPFSAAALQRIVLNFVLAGRDTSSVALTWFFWLLMNHPHVEEKIMHEITTVLSDTRGVDRRRWTEDPLDFGEADRLVYLKAALAETLRLYPSVPQDFKQAIADDVLPDGTLVPAGSTVTYSIYSAGRVETIWGEDCMDFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLRVFVHPRKLHGGPGVPT* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01976 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Lapu8g01976 520 FunFam Cytochrome P450 25 513 - -
Lapu8g01976 520 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 PANTHER CYTOCHROME P450 23 504 - -
Lapu8g01976 520 Pfam Cytochrome P450 87 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 SUPERFAMILY Cytochrome P450 25 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu8g01976 520 CDD CYP86A 70 503 - -
Lapu8g01976 520 Gene3D Cytochrome P450 26 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01976 Lapu-Chr8 37380174 37382708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01976 3 510 Cytochrome P450 AT5G58860 73.333 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01976 K15401 - gmx:100788343 920.613