Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01967 ATGGAGGATGAAGATTTGGAGAACAACAATGAGAAGACAGCAATGGTGAGAAAGAAGTCAGAAGTGGTTGTGGTGGCAAGAAACAATGGTCGTTTAGAAATGCTTAGGAATTTGATGACCAATTTGCAAGTGGTGTTTCTTGGTACTAAGCTTGTTGTGCTTTTTCCAGCAGTCCCTTTGGCTGTTGTTGCAAGTTTTTATGGCTTTGGAAGGCCTTGGATCTTTGCTTTCAGCCTCCTTGGACTTGCTCCTCTAGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCAACTTGTGGAAATGCAACCGAGATGATCATAGCCTTATTAGCACTTCATCAGAACAAAGTAAACGTTGTGAAGTTGTCCTTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGAAGCTCACTCCTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAGCAACGATATGACAGAAAACAGGCTGATGTAAACTCACTGCTTTTGTTGCTGGGATTGCTGTGCCATTTGCTGCCATTGCTGTTCAGATATGCCTTAGGAGGGGCCCATCATTCCATAGCCACTAACACTCTCCAGTTGTCCAGAGCAAGCAGTGTTGTTATGCTTCTAGCATACCTTGCTTACATCTTCTTCCAATTAAAAACTCATCGAAAATTGTTTGATTCACAAGAGGAGGAGGAAGATGAGGAGAAGGCAGTGATAGGATTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACAATGGTCATATCTTTACTTTCTGAATATGTAGTGGGAACCATCGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATCAGCATAATTTTGCTACCAATCGTTGGAAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGGGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTATAAGAATGGATTTGGACTTCAGTCTTCTTGAAACAGGATGTCTTGCTTTTACAATTATAGTGACAGCCTTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTGTGTTACATTGTCATTGCTGCATGTTTTTTTGTTCTCAAAACTCCTCTAACTGGTAAGATAAAAAAATTCACCTTATGGATTACTAAACCTTGTCTCAGGGATCAACTGCAAAGTGGATATTTTTATTCATTGTGTGCCTTTGACAGAGGCTTTGAGCAACATCATAAACTACAAAAATAG 1347 0.4128 MEDEDLENNNEKTAMVRKKSEVVVVARNNGRLEMLRNLMTNLQVVFLGTKLVVLFPAVPLAVVASFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLLFRYALGGAHHSIATNTLQLSRASSVVMLLAYLAYIFFQLKTHRKLFDSQEEEEDEEKAVIGFWSAFTWLVGMTMVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFSLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLCYIVIAACFFVLKTPLTGKIKKFTLWITKPCLRDQLQSGYFYSLCAFDRGFEQHHKLQK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01967 448 NCBIfam calcium/proton exchanger 56 399 IPR004798 GO:0006816|GO:0015369
Lapu8g01967 448 NCBIfam calcium/proton exchanger 37 399 - -
Lapu8g01967 448 Gene3D - 102 400 IPR044880 -
Lapu8g01967 448 FunFam Vacuolar cation/proton exchanger 246 400 - -
Lapu8g01967 448 Pfam Sodium/calcium exchanger protein 256 397 IPR004837 GO:0016020|GO:0055085
Lapu8g01967 448 Pfam Sodium/calcium exchanger protein 73 230 IPR004837 GO:0016020|GO:0055085
Lapu8g01967 448 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 15 402 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lapu8g01967 448 FunFam Vacuolar cation/proton exchanger 102 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01967 Lapu-Chr8 37264579 37268849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01967 9 404 Antiporters AT2G38170 66.832 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01967 K07300 - gmx:100802344 663.685