Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01949 ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTCTTCTCTCCCTCATCTTCCCTCTTCTGCTCCAAGCCTTCCATCATCTCTTCTTCGCCCGAATCCCTTTCGCTCTCCCTCTCCCACCTCAAACCAACCAGCTCTAACCCGGCGTCCTCTTGCTCCTCTTGTTCTTCTCCTTCTGCCGTGCCTGCTTCTTCCTCTCCTTCTTCTCCTTTTCGGCTTCGCCTTCCCAAGCCTCCCTCTGTCTTCTCTGTGTCCTCTGCTTCCTCCACGTCCCCCAACGGCACCGTTTTGAAGAGGAAGCGACCAGCCAGGCTGGACATACCCGTTTCCTCTCTCACCTTCGGGGTTCCGCCCACTCCCTCCGCTGCGGCGCGTGACGTCGTCGAGGCCGAGGAGGATGGGTTTGGGGTGTACTGCAAGAGAGGGAGGAGGGAGTACATGGAGGATCGTTACACAGCTGGGAATAATCTACGCGGTGAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCACGGAGGTGCAAAGGCTGCTGAATTTGCTGCAAATAACTTAGAAAAGAATGTCTTGGATGAAGTGATTGTGAGAGATGAAGATGATGCTGTGGAGGCAGTGAAGCGTGGGTACCTCAAGACAGACTCAGATTTCCTGAAGGAGGATCTCCATGGTGGCTCTTGCTGTGTGACAGCATTGATTAGGAACGGCAACCTTGTTGTGTCCAACGCCGGTGATTGCCGTGCTGTCATTAGCAGAGGGGGTGTTGCTGAAGCCCTAACATCTGATCACAGGCCTTCAAGGGAAGATGAAAGGGACAGAATTGAGAGCCTGGGTGGCTATGTCGATTTATGTCGCGGTGTTTGGAGGATCCAGGGATCTCTTGCTGTGTCTAGGGGAATTGGAGATAGACACCTGAAACAATGGGTGACTGCAGAACCTGAGACCAAAGTTCTCAGAATTGAACCCGAACATGATTTGTTAATCTTAGCTTCAGATGGACTTTGGGATAAGGTTAGTAATCAGGAAGCAGTAGACATTGCTCGTTCTTTTCTCGAGGGGAACAACAAATCACAGCCATTGCTGGCTTGTAAAAAGCTTGCAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACAAGCGTTATGCTAATCAAATTAGAACACTATGTTTAA 1170 0.506 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPESLSLSLSHLKPTSSNPASSCSSCSSPSAVPASSSPSSPFRLRLPKPPSVFSVSSASSTSPNGTVLKRKRPARLDIPVSSLTFGVPPTPSAAARDVVEAEEDGFGVYCKRGRREYMEDRYTAGNNLRGEHKLAFFGIFDGHGGAKAAEFAANNLEKNVLDEVIVRDEDDAVEAVKRGYLKTDSDFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARSFLEGNNKSQPLLACKKLADLSVSRGSMDDTSVMLIKLEHYV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01949 389 Gene3D - 125 388 IPR036457 -
Lapu8g01949 389 PANTHER PROTEIN PHOSPHATASE 2C 74 383 IPR015655 GO:0004722|GO:0006470
Lapu8g01949 389 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169
Lapu8g01949 389 SUPERFAMILY PP2C-like 135 386 IPR036457 -
Lapu8g01949 389 Pfam Protein phosphatase 2C 135 377 IPR001932 -
Lapu8g01949 389 MobiDBLite consensus disorder prediction 37 57 - -
Lapu8g01949 389 CDD PP2Cc 134 385 IPR001932 -
Lapu8g01949 389 ProSiteProfiles PPM-type phosphatase domain profile. 134 385 IPR001932 -
Lapu8g01949 389 FunFam probable protein phosphatase 2C 25 127 388 - -
Lapu8g01949 389 SMART PP2C_4 124 383 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01949 Lapu-Chr8 37015372 37018310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01949 1 389 PP2C-type Phosphatase Gene Family AT2G30020 63.951 1.79e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01949 K17506 - gmx:100797934 596.275