Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01940 ATGGCATTCGAGAAGTTCATAATCCGAAGCTATGAGGGTCACTCTGATAGAGCTCAGGTAGAAGATCTTGAGAGACGATGCAAGGTAGGGCCATCAGAAAGCGTGTTAGACACTATGGGTGACCCCATGTGTAGGATTCGAAGCAGTCCCATGTACATAATGCTGGTAGCAGAGATGGACAATGAATTGGTTGGTGTCATTCAAGGCTTAATAAAAATGGTTACACTTCATACTCATCCTCCAAAGGATATGGTAAAGGTGGGGTATGTCTTAGGCCTCAGAGTTTCTCCCCATAGTAGAAGAAAAGGCATTGGCTCAAGTTTAGTGCAAAGGCTGGAAGAATGGTTCACTTCTAATAGTGTGGAATATGCATACACTGCCACAGAGAAAGAAAATCACGCCTCAATGAATCTCTTCATGGACAAGTTTTGCTACACCAAGTTTCGGACTCCAACTATACTCATAAACCCAGTGAATCATCACCTGTTTCAGATCTCATCCAACATAGAGATAACTATGGTAAAGGTTGAAGAGGCTGAATCTCTCTACAGAAGATTCATGGGATCCACTGAGTTCTTCCCTAGTGACATAGAGAATATACTAAGGAACAAGCTAAGCTTGGGAACTTGGGTAGCTTATTTCAAAGGGGATAGTGATTTTGGTTTAGATGGACAAGTTCCCAATAGTTGGGCTATGCTCAGTGTTTGGAACTGTGGGGAAATCTTCAAGCTAAGGCTAGGGAAAGCACCTTTGTCTTGCATGTTATTCACAAAGAGTTGGAGCTTGATGGGTAGAATCTTCCCATGCATGAAATTGCCAACCTTGCCCAATTTCTTTCGTCCTTTTGGATTCTACTTCATGTATGGTGTGTACCAAGAAGGACTGTTTTCTGAAAAGTTGGTTAGGGCATTATGCAAGTTTGTGCACAACATGGCTTCTAGGAGTGAACAGTGTAAGATCATTGTGACAGAAGTTGGAGGAAGAGATGATCTGATTCATCATATTCCACATTGGAAATTGCTCTCTTGTCAAGACTTCTGGTGCATAAAGGCTTTGAAAAATGAAGGGACTTACAAGTTTCACCAATTCAGCAACACTCTACCGCCAAGACCTCTCTTTGTAGACCCACGAGAGGTCTAA 1140 0.4228 MAFEKFIIRSYEGHSDRAQVEDLERRCKVGPSESVLDTMGDPMCRIRSSPMYIMLVAEMDNELVGVIQGLIKMVTLHTHPPKDMVKVGYVLGLRVSPHSRRKGIGSSLVQRLEEWFTSNSVEYAYTATEKENHASMNLFMDKFCYTKFRTPTILINPVNHHLFQISSNIEITMVKVEEAESLYRRFMGSTEFFPSDIENILRNKLSLGTWVAYFKGDSDFGLDGQVPNSWAMLSVWNCGEIFKLRLGKAPLSCMLFTKSWSLMGRIFPCMKLPTLPNFFRPFGFYFMYGVYQEGLFSEKLVRALCKFVHNMASRSEQCKIIVTEVGGRDDLIHHIPHWKLLSCQDFWCIKALKNEGTYKFHQFSNTLPPRPLFVDPREV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01940 379 Pfam Acetyltransferase (GNAT) family 51 140 IPR000182 GO:0016747
Lapu8g01940 379 CDD NAT_SF 54 125 - -
Lapu8g01940 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 208 IPR000182 GO:0016747
Lapu8g01940 379 Gene3D - 8 143 - -
Lapu8g01940 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 139 IPR016181 -
Lapu8g01940 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01940 Lapu-Chr8 36895163 36896468 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu8g01940 Acetyltransf_1 1.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01940 - - pvu:PHAVU_008G259100g 716.842