Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01938 ATGGGAGAAGTTAAGGTTAGAGGGAAGTTGGTAGAAGAAAAAATATGGTCAAAGATACCCACTCCAATTAAGCCTATTCCTCTGAGAGCTCAAGCTACATCATTTCAACCATGGCTAAAACCCTTCAATCCACATCATAAGCTTCCCACTATTCCAGAAAATGATCAAATTCTTACAGAGGAAAACTCTGCCAATGGAGATCACAACACTTCCAATGCAAACATTGAGCAAGAAATGGGAAATAAGTTTAAAAGAATCGTCTCAAACCGACATGATGCACGAAGATCGAGGTTGAAGAAACTTGCATACATTCAGGCGTTGGAAAACGATTTGCAATCGTACGAGAGGAAAAAAGAGGTTCTCCATGAACAAATTGCAGAGCAACGAAAGAAGCAGCTGGTGTTGGAAATTGAGCATCATACCTTGAAATTCCACATGGCTGCTCATGAAAAGCAAAGAATTCTCCAAGAAGTTGAGATGGAAAAGAACAGAGCAGAAATGGATAGAATGATGGAAGTGCAAAGGAAAATGCTTAATTTCACATCTTTGCAGCTTATGACCAATTCCAACTTCAACTCTTCAGCCTTGGCATGA 594 0.3973 MGEVKVRGKLVEEKIWSKIPTPIKPIPLRAQATSFQPWLKPFNPHHKLPTIPENDQILTEENSANGDHNTSNANIEQEMGNKFKRIVSNRHDARRSRLKKLAYIQALENDLQSYERKKEVLHEQIAEQRKKQLVLEIEHHTLKFHMAAHEKQRILQEVEMEKNRAEMDRMMEVQRKMLNFTSLQLMTNSNFNSSALA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01938 197 PANTHER BASIC LEUCINE ZIPPER 34 61 188 - -
Lapu8g01938 197 Coils Coil 148 168 - -
Lapu8g01938 197 Pfam Basic region leucine zipper 84 130 IPR004827 GO:0003700|GO:0006355
Lapu8g01938 197 SUPERFAMILY Leucine zipper domain 82 135 IPR046347 GO:0003700|GO:0006355
Lapu8g01938 197 Coils Coil 104 131 - -
Lapu8g01938 197 Gene3D - 81 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01938 Lapu-Chr8 36864109 36865908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01938 53 157 bZIP Transcription Factor Family AT3G58120 28.829 1.90e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu8g01938 bZIP_2 1.4e-05 CL0018