Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01936 ATGGCACCATTCACTCCGCTGAAGTTATTGCCGGCGGTGCTGACTCTGTTGTTGGCGTTGAGCCAGAAACAGAGTCTCTGTTCGACGCTCGAGAGCGAAGGTTTGGCGCTGCTGGCGTTGAAGGAGCGGGTGGTGACAGACCCGCAGGGGGCTTTATCAAGCTGGGGTGGCGAAAATGGAGACGTTATGGATCCATGCTCGTGGTTCGGTGTGGCGTGCTCTCACGGTTATGTTGTGACCTTAAATTTGGAAGGCCTTTGTCTAGAAGGAACACTATCACCAGAAGTTGGAATGCTGGCTCACATAAAAGCAATCATTTTGCGCAACAATTCTTTCTTTGGAGAAATTCCCAAGGAGATTCTACAGTTGCAGGAGTTGGAAGTCCTTGACTTGGGACACAACAACTTTAGTGGATCACTTCCATTTGACCATGGCAATATGCCATCCCTGAACACTCTTTTATTGGACAACAATTACCATCTGACCAACTTAGCTCCGGATCTGTATAAGCTCAAGATGAATTCTGAATTTCATGCTAGTGAAGAACTAACTGGTGCCACCACTGCTAGAGAAGCACATGTTGGCAGATGTAGTTTACGGCACATTGGCCAGCATGGGGATAGAGCATACAGGAGGAAGCTTCTCAAAGTAGCAAATGCTGCTAGTACACCAAGAATCCAAGACCAAGGAATACTTAAACAACCGGCATCGCATTTCCCTTTTTCATTACCACCAAATTTTGAGCCTTTCTCATCATCACCGTCACTTTCACCGTCAGAAAGCCCCTCATATTCGCCATCGCCCTCTCCCTCGGATATTTTCTTCCCTCCTTCGCCTGCAGTGTTACTAACTCCAGACGCATCACCCCCAGCAAACACTCCTCTCACTGTGTCTACACCGCCAGTTAATTGGGTTTCAGCACCTAGCCCTTCTCCACTTTCGACCCACGGGAACACATACAATTCCAATCAAATCCATCACTCCGCGATAATCTGGGCTGCAGTTGGGGGTTGCTCTTTTTTTATTTTGATGTCAGCCATTATTTTTGCATGCTTCCGAAGTAGGAAGGTTGTGACTGTTAAACCCTGGTCCACAGGATTGAGTGGCCAGCTGCAGAAAGCCTTTGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAAATTGAAGCAGCTTGTGAATATTTCAGCAACATTATCGGTTCTCTTCCTGATGGAACTGTGTATAAGGGGACTCTCTCTAGTGGTGTTGAGATAGCTGTAGCGTCCTCTGCAGTGAACACAGCTCAAAAATGGTCCAAAAGTATGGAAGCTCAATTCCGAAATAAGATAGCAACATTATCTAGAGTGAATCACAAGAATTTTGTGAATCTAATTGGGTACTGTGAAGAAAATAAGCCATTCTCAAGAATGATGGTATTTGAGTACGCTCCAAATGGAACACTCTTTGAGCATATACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCACGACCTAAAACCCTCCATTGCCCATAGGAACCTGCAATCTTCATTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCTGCAAAGAATGGGTCTGCAACCACACAACTCTTGGAAACATCATCAGCAGATGCCAAGGACAATGTTTACAGCTTTGGAATAATATTGTTTGAGTTGATTACGGGGAAAATCCCCCTTGCCGGGAACAATGAACTTCTGGCAGATTGGGCAGCAGAATATTTAAGGTGGGGGAAATCCTTAAGGGATGTTGTGGATCCAAAATTGAACTCTCTGCAAGAAGAAGAGATCGAAGAATGGTCTGAAGTGATAAGAAACTGCGCACATCCAGATCGAGAGAAAAGGCCAACTATGAAAGAAGTTACATCTAGACTCAAGGAAATAACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCAATTACGTCCACTGATTCAAGTTGA 2055 0.4472 MAPFTPLKLLPAVLTLLLALSQKQSLCSTLESEGLALLALKERVVTDPQGALSSWGGENGDVMDPCSWFGVACSHGYVVTLNLEGLCLEGTLSPEVGMLAHIKAIILRNNSFFGEIPKEILQLQELEVLDLGHNNFSGSLPFDHGNMPSLNTLLLDNNYHLTNLAPDLYKLKMNSEFHASEELTGATTAREAHVGRCSLRHIGQHGDRAYRRKLLKVANAASTPRIQDQGILKQPASHFPFSLPPNFEPFSSSPSLSPSESPSYSPSPSPSDIFFPPSPAVLLTPDASPPANTPLTVSTPPVNWVSAPSPSPLSTHGNTYNSNQIHHSAIIWAAVGGCSFFILMSAIIFACFRSRKVVTVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVNTAQKWSKSMEAQFRNKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHIHIREAEELNWTMRMRIAMGIAYCLEYMHDLKPSIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCAAKNGSATTQLLETSSADAKDNVYSFGIILFELITGKIPLAGNNELLADWAAEYLRWGKSLRDVVDPKLNSLQEEEIEEWSEVIRNCAHPDREKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01936 684 Gene3D Ribonuclease Inhibitor 29 205 IPR032675 -
Lapu8g01936 684 FunFam Leucine-rich repeat receptor-like kinase 34 164 - -
Lapu8g01936 684 Gene3D Transferase(Phosphotransferase) domain 1 475 663 - -
Lapu8g01936 684 ProSiteProfiles Protein kinase domain profile. 392 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01936 684 Pfam Protein tyrosine and serine/threonine kinase 397 653 IPR001245 GO:0004672|GO:0006468
Lapu8g01936 684 SUPERFAMILY L domain-like 28 172 - -
Lapu8g01936 684 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Lapu8g01936 684 MobiDBLite consensus disorder prediction 250 270 - -
Lapu8g01936 684 PANTHER PROTEIN MALE DISCOVERER 2 12 681 - -
Lapu8g01936 684 Gene3D Phosphorylase Kinase; domain 1 360 474 - -
Lapu8g01936 684 SUPERFAMILY Protein kinase-like (PK-like) 387 653 IPR011009 -
Lapu8g01936 684 FunFam Inactive receptor-like serine/threonine-protein kinase 366 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01936 Lapu-Chr8 36843947 36851786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01936 28 656 Receptor kinase-like Gene Family AT1G25320 25.000 1.78e-44 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu8g01936 PK_Tyr_Ser-Thr 4.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01936 - - gmx:100779427 1055.05