Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01923 ATGGGTGGTAATTCTTTACCTTGTGCTTCGTGCAAGCTTTTGAGACGCCGTTGCTCTCAGGATTGCATCTTTGCTCCTTATTTTCCTTCCAGTGATCTCCACAAGTTTGCCATTGTGCACAAGGTCTTTGGCTGCAGCAATATCACCAAACTGCTAAAGGATGTTCCGGTTGAGCAAAGAGAAGATGCAGTGACGAGTTTAGTTTATGAGGCAAATGCAAGAGTTAGAAACCCTGTTTATGGTTGTGTTGGAATCATATCTAACCTAGAAACTCAAGTTTCTGACTTACAGATGCAGCTAGCAGCAGTTCAGGCAGAGATTCTCAATATAAAAATGCAGCAAGATATATTTACCTTCACCAATGGTGGT 369 0.4201 MGGNSLPCASCKLLRRRCSQDCIFAPYFPSSDLHKFAIVHKVFGCSNITKLLKDVPVEQREDAVTSLVYEANARVRNPVYGCVGIISNLETQVSDLQMQLAAVQAEILNIKMQQDIFTFTNGG 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01923 123 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lapu8g01923 123 Coils Coil 86 113 - -
Lapu8g01923 123 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lapu8g01923 123 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01923 Lapu-Chr8 36685801 36686407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01923 1 115 AS2 family AT2G30130 73.276 4.26e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01923 LOB 1.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01923 - - ming:122087650 184.111