Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01922 ATGGGATGCACTTCACTCCTCAGAAGCCCCAAGAGAGAAGAGCAAGAGGTACCAGATGCTATCACTTCCTTATTACCAAATTCCAACCAATCTTACGCCTATGAAGATTTCAATATTTTGGACGAACTGCAAGGGGTCTTCAACTCCAAGGAGGAACAGAAGTTGCTGCAACAAAACTCTTCGAGTGGCGAACTTCATTGGGATTTCATGGAATGGGAGGAATTCGCCCCCATTGGAGAGGAAGGAGAAGATGAAAACGAAGGGAAAGAGCTGGTGAGAGAGAGCATGAGCCAGTACCCTTTTGAGGAGCAGCAGATACAGAGAGAAAACATTGTTGGGTTTTGGGAAACGGATGATGAGAAGATGGTGGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTAACCGAGGCTCTCTATGGGCTGATGACTGTTCTCTTTCCTTGGCCACCAACAATGGCTACTATAACGGAGAAGTGCCAGTGTTGGAAGAAGAGAGAGCAAGAAGAGAAGCAAGTGTTCTCAGATACAAAGAAAAACGTCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4434 MGCTSLLRSPKREEQEVPDAITSLLPNSNQSYAYEDFNILDELQGVFNSKEEQKLLQQNSSSGELHWDFMEWEEFAPIGEEGEDENEGKELVRESMSQYPFEEQQIQRENIVGFWETDDEKMVALNLNLNYQEVLDAWSNRGSLWADDCSLSLATNNGYYNGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01922 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 13 216 - -
Lapu8g01922 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Lapu8g01922 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01922 Lapu-Chr8 36679262 36680403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01922 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 47.899 1.15e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu8g01922 CCT 2.2e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01922 - - gmx:100801038 341.658