Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01903 ATGGGTGAAGAAGTGAAGACAATTGTTCCAGAGTCCGTTCTGAAGAAGCGTAAGAGGGAAGAGGAATGGGCTTTGGCGAAGAAGCAAGAGCTCGAAGCTGAGAAGAAGAAGAGAGCCGCTATCCGCAAAACCATCTACAACAGAGCCAAGCAGTACGCAAAGGAGTACGATCAGCAGGAGAAGGAATTGATTCGGTTGAAACGCGAGGCTAAGCTTAAAGGTGGATTTTATGTGGATCCAGAGGCTAAGCTCTTGTTTATCATTCGCATTCGTGGTATCAATGCGATGGACCCCAAATCAAGGAAGATCCTGCAGCTGTTGCGATTGAGACAGATCTTCAATGGTGTATTTCTCAAGGTTAACAAAGCCACCATGAACATGCTGCACAGAGTTGAGCCTTATGTGACATATGGATACCCAAATCTGAAGAGTGTGAAAGAACTTATTTACAAGAGAGGGTATGGAAAGCTCAACAAGCAGAGGACTGCTCTAACTGACAACTCTATCATTGACCAGGCACTGGGCAAATATGGAATCATTTCTGCCGAAGATCTTATCCACGAGATCATAACTGTTGGACCTCACTTCAAGGAAGCTAACAACTTCCTATGGCCATTTAAGCTCAAGGCTCCTTTGGGTGGGTTAAAGAAGAAGAGAAACCACTATGTTGAGGGAGGTGATGCTGGAAACCGGGAGAATTACATCAATGAGCTAATCAGGAGAATGAATTGA 732 0.4467 MGEEVKTIVPESVLKKRKREEEWALAKKQELEAEKKKRAAIRKTIYNRAKQYAKEYDQQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRTALTDNSIIDQALGKYGIISAEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01903 243 FunFam 60S ribosomal protein L7 189 243 - -
Lapu8g01903 243 FunFam 60S ribosomal protein L7 141 203 - -
Lapu8g01903 243 Gene3D - 87 238 IPR036919 -
Lapu8g01903 243 Gene3D - 141 203 - -
Lapu8g01903 243 Coils Coil 42 73 - -
Lapu8g01903 243 Pfam Ribosomal protein L30p/L7e 85 135 IPR016082 -
Lapu8g01903 243 SUPERFAMILY Ribosomal protein L30p/L7e 84 243 IPR036919 -
Lapu8g01903 243 NCBIfam 60S ribosomal protein uL30 10 243 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lapu8g01903 243 FunFam 60S ribosomal protein L7 84 188 - -
Lapu8g01903 243 ProSitePatterns Ribosomal protein L30 signature. 103 135 IPR018038 -
Lapu8g01903 243 Coils Coil 14 34 - -
Lapu8g01903 243 Pfam Ribosomal L30 N-terminal domain 9 80 IPR012988 -
Lapu8g01903 243 PANTHER 60S RIBOSOMAL PROTEIN L7 7 243 IPR039699 -
Lapu8g01903 243 CDD Ribosomal_L7_archeal_euk 84 243 IPR035808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01903 Lapu-Chr8 36527364 36528993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01903 4 243 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.667 1.58e-156 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01903 K02937 - gmx:100813342 410.994