Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01899 ATGGGCAAGGCTTGCGAGCTTTGCAGTAACCAAGCTTCTCTCTATTGTCCCTCCGATTCCGCATTTCTCTGCTGGGACTGCGACGCTGCCGTGCACGCTGCCAACTTCCTCGTCGCTCGCCACTTCCGCCGCCGTATCTGCTCTAAATGTGATCGTTTCACCGGAATCTATATCTCCGGCGGCATCCTCCCGTCCACCTGCACCTCTTGCTCGCCGGAAAAGGCTCCTTCCGACGACGACGGCGATTCTCTCGCTTCCTCTTCCACCTGCGTCTCCAGTTCTGAGTCCTGCGTCACGAAGAAGATTAAGGAGAGACGCGCGGCCGCGGGGAAGAAAAGGAGGAGGAGTTTTTCGAGTTCCGTGTCCGACGACGACGACGCGTCTCAGGAAGCGAAAAAACGACGGAAAAACGTCGGATCGGAGGAACTGGAGGAGGTGTTTGGAAAATGGAGCAGGGAGTTAGGGTTAGGGTTAGGAGAGAACGGTAACCGCGTGGCGTCGCACGCTCTGAGCGTGTGCCTCGGAAAGTGGAATTTGCTTCCGTTCAGGGTGGCTGCAGCGACGTCGTTTTGGCTGGGCCTGAGATTTTGTGGGGACAGAAGTGTGGCCACGTGGCAGAATCTGGCGAGGTTGGAGAAAATCTCCGGAGTGCCAGCTAAGCTGATTCTGGCCGCACATGCGAACCTCGCACGTGCCTTCACGCTTCGCCGCGAATTGCACGAGGGATGGGGCGAGTCCTAG 741 0.5789 MGKACELCSNQASLYCPSDSAFLCWDCDAAVHAANFLVARHFRRRICSKCDRFTGIYISGGILPSTCTSCSPEKAPSDDDGDSLASSSTCVSSSESCVTKKIKERRAAAGKKRRRSFSSSVSDDDDASQEAKKRRKNVGSEELEEVFGKWSRELGLGLGENGNRVASHALSVCLGKWNLLPFRVAAATSFWLGLRFCGDRSVATWQNLARLEKISGVPAKLILAAHANLARAFTLRRELHEGWGES* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01899 246 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lapu8g01899 246 SMART bboxneu5 1 46 IPR000315 GO:0008270
Lapu8g01899 246 MobiDBLite consensus disorder prediction 106 138 - -
Lapu8g01899 246 MobiDBLite consensus disorder prediction 116 138 - -
Lapu8g01899 246 CDD Bbox1_BBX-like 4 46 - -
Lapu8g01899 246 Pfam B-box zinc finger 4 33 IPR000315 GO:0008270
Lapu8g01899 246 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01899 Lapu-Chr8 36474971 36476176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01899 1 246 C2C2-CO-like Transcription Factor Family AT3G21150 32.669 1.35e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu8g01899 zf-B_box 3.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01899 - - pvu:PHAVU_008G254400g 357.451