Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01886 ATGTTTGAGATGGGGATATACCTCAGCGCTCCCAAAACAGATAAGGCCTCTGAAGATGGCGAGAACGATAAGCTGCGCTTTGGTTTGTCTTCCATGCAGGGTTGGCGCGCTTCCATGGAAGATGCTCATGCAGCTATCCCATATTTGGACGAGTCTACATCTTACTTTGGCGTTTATGATGGCCATGGAGGCAAAGCAGTCTCTAAGTTCTGTGCCAAGTATCTACACCAGCAGGTCCTGAAGAGTGAACCTTACCAAGCTGGAGATATAGGCACATCTTTACAGAAATCTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGGGATAAAATAGAAAAGTTATCTGGTATGCTAGAGGGCTTTATTTGGTCTCCCAGGAGTAGTGAAGCCAATGACCGTATTGATGATTGGGCATTTGAGGAGGGACCCCATTCTGATTTTACTGGACCAAATTCTGGAAGCACAGCTTGTGTGGCTGTCATCCGAGGAAACAAACTTGTTGTTGGTAATGCTGGAGATTCTAGATGTGTCTTGTCAAGGAAAGGCCAGGCACACAATTTATCTAAGGATCACAAGCCTGACCTTGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATTCAAGTTGGACGGGTCAATGGAAGTCTAAACTTGGCGAGAGCAATTGGAGATACGGAGTTCAAGCAGAATAAGTATTTGCCTGCCGAAAAGCAGATTGTGACTGCTGATCCGGACGTAACTTCAGTTGAACTTTGTGATGATGATGAATTTCTTGTGATAGCCTGTGATGGAATATGGGATTGTATGTCTAGCCAACAGCTTGTGGACTTTATACATCAACAGTTAAAGACAGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAAACCTTCCAGCCCAAATGTTTCTGTCACGAACCAGCCCCAATCGTCTGCTGAACCACCTGAAGCCGATAGAAGTTCAGAGAAAAAAGTGGAATCGAAGTGA 1098 0.4463 MFEMGIYLSAPKTDKASEDGENDKLRFGLSSMQGWRASMEDAHAAIPYLDESTSYFGVYDGHGGKAVSKFCAKYLHQQVLKSEPYQAGDIGTSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANDRIDDWAFEEGPHSDFTGPNSGSTACVAVIRGNKLVVGNAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDTEFKQNKYLPAEKQIVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHQQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKPSSPNVSVTNQPQSSAEPPEADRSSEKKVESK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01886 365 PANTHER PROTEIN PHOSPHATASE 2C 21 330 IPR015655 GO:0004722|GO:0006470
Lapu8g01886 365 SUPERFAMILY PP2C-like 6 333 IPR036457 -
Lapu8g01886 365 MobiDBLite consensus disorder prediction 336 365 - -
Lapu8g01886 365 ProSiteProfiles PPM-type phosphatase domain profile. 26 331 IPR001932 -
Lapu8g01886 365 CDD PP2Cc 26 331 IPR001932 -
Lapu8g01886 365 ProSitePatterns PPM-type phosphatase domain signature. 55 63 IPR000222 GO:0043169
Lapu8g01886 365 Gene3D - 3 332 IPR036457 -
Lapu8g01886 365 Pfam Protein phosphatase 2C 143 316 IPR001932 -
Lapu8g01886 365 Pfam Protein phosphatase 2C 26 107 IPR001932 -
Lapu8g01886 365 MobiDBLite consensus disorder prediction 336 352 - -
Lapu8g01886 365 SMART PP2C_4 16 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01886 Lapu-Chr8 36349359 36358416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01886 4 335 PP2C-type Phosphatase Gene Family AT2G25070 76.276 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01886 K17499 - gmx:100776787 686.026