Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01883 ATGAAAATCAAACTATGGTTGATCATTGTTGGAGGGTTTTTCAGTTATTCCCTCATCATTCTTCGTTCCACTTTAGATCCTCAATCCTTATATATTAGACCTCAAGACCAAGATCTTGCAACAATTCGAATTGATCCCCGATCACAATCACAATCACAAGTAAGCAGTGGTAGTGTTTCTCCACTTGATTCACCTCGTGTTCCTGTTCCTCCACAAGGTGATCCTACCCACCCGGGTTCACCTTTACTTCAAGGCAATGGTCGTAGAGGTCTTGCCAGGATGCACTTTGTGAGTCATGTAGAAGAGCTTAAAAAGGAGAATGAGAAGGTTATCGACACAATTTTGAAGCTTGTGGGTGGATACCTTAGGGCTAATGTTGTGAATGAAGACCAGATTGCAGTGCCGGAAATACAAGCTGACGACAACTTTGTGAAAGACATGTTACCGTTGGAACTCATGAACAAACTTCGCGAAACTGGGAGGTTGATGTTTCAGAATGAGTGCCGCAGTTTGTACAGCAGTTGTAGAAGGTTGTTTCTGAAGGAGTGTTTGTCAAAACTCGGATTGGAAGTTGATGAGCTCAACGTGGAGAACTTTGACAAGACGGAGAAGATTGAGAGTTTCATAAAAGCTTTGAACATAACTGTGAGGATACTCTTTCCCAATGAAAGGACACTCTGTGATCTCGTGTTCCCACAGTCTTACAATGCAGATATCTCATTCGGTGAGGTTTGCAGTGAATTGAGTATCAGTCTGTTAAGATTTGTGAATATATTAGCAACTGAGAATCATCAATGGTCTTACCATCTGGTTCATGTCATTCCCAACGTGTTCAAGACTTTGATTGACCTCATCCCAAAGTTCGATTCACTGTTTTATGGTCAGTTGTTCAGTGAATCACTCAGAAATGGTGCAGTTCTTGTGGGGAAGAGATTGGGTGTTTTTGTTGAGTTGGAGAGCCTTATTCACCGTGAAGTGGCTAAGGAGACTGTTCCCAATGGTGACATTCATCCAACTACCCACACAGTGATGGACTACCTCAGAGAAGTTTTCACGGATGATGAGACTTTCCCAATTAAAAGGGGAATATCTTCATTTTCAGATCAGGTAGCTAGAATAATGCAAGTGTTACACACAAATTTGGAAGCCAAGTCCAAAAGCTATACAGATCCTGCATTAGGCCATATTTTCATGATAAACAATTTGACGTTTTTACAATATGGAGAAGATTATATATATGGAATAATTTTAGGCCCAGATTGGTACAAATCAAAGATCAACCAAAACATTGAACTCTATCAAAGAAGCTCGTGGGACAAGTTATTGGACCTTTTGAAGGTAAACAGTAGGGAGTTGGTAGCAGAGTCTATGAAAAAGAAGCTCGAATTGTTCAACCAGCACTTCAAGGAGATATGCAAAGCTCAGTCTGAATGGTTTATCTTTGATGGAGAGCTAAGGGAACAGATGATAAAATCCATAGAGAACACATTGTTGCCTGCATATGGAACCTTTATTGGAAGGATTCATGATGTTATTGGGAAGGATGCGTATGAGTTCATCAGGTATGGAATGCAGAACATTCAAGATCGCCTGAGCCATTTGTTTGTTGTCAGTATAGAGAATTAG 1626 0.4053 MKIKLWLIIVGGFFSYSLIILRSTLDPQSLYIRPQDQDLATIRIDPRSQSQSQVSSGSVSPLDSPRVPVPPQGDPTHPGSPLLQGNGRRGLARMHFVSHVEELKKENEKVIDTILKLVGGYLRANVVNEDQIAVPEIQADDNFVKDMLPLELMNKLRETGRLMFQNECRSLYSSCRRLFLKECLSKLGLEVDELNVENFDKTEKIESFIKALNITVRILFPNERTLCDLVFPQSYNADISFGEVCSELSISLLRFVNILATENHQWSYHLVHVIPNVFKTLIDLIPKFDSLFYGQLFSESLRNGAVLVGKRLGVFVELESLIHREVAKETVPNGDIHPTTHTVMDYLREVFTDDETFPIKRGISSFSDQVARIMQVLHTNLEAKSKSYTDPALGHIFMINNLTFLQYGEDYIYGIILGPDWYKSKINQNIELYQRSSWDKLLDLLKVNSRELVAESMKKKLELFNQHFKEICKAQSEWFIFDGELREQMIKSIENTLLPAYGTFIGRIHDVIGKDAYEFIRYGMQNIQDRLSHLFVVSIEN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01883 541 MobiDBLite consensus disorder prediction 45 85 - -
Lapu8g01883 541 Gene3D Exocyst complex component Exo70 93 540 - -
Lapu8g01883 541 Pfam Exo70 exocyst complex subunit 209 532 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu8g01883 541 PANTHER EXOCYST COMPLEX PROTEIN EXO70 141 535 IPR004140 GO:0000145|GO:0006887
Lapu8g01883 541 MobiDBLite consensus disorder prediction 45 62 - -
Lapu8g01883 541 SUPERFAMILY Cullin repeat-like 124 535 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01883 Lapu-Chr8 36299399 36301024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01883 128 535 EXO70 exocyst subunit family AT5G58430 41.124 7.99e-90 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01883 K07195 - pvu:PHAVU_008G252500g 895.19