Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01882 ATGGTCATCAAGATTAAGAGTTGGCTGCTGCAGCCAAAGGTATGGAGATTTGTGAGTTTTATTTCATCTATTGTTGGACTTTTCTGTTATGCTTTCAGCTCTTCTTTCAATCATCTATGCGGAGATTGGACCTGGTGGAAGATCTTTCTTTATATTGGTTTTAGTTTGTTCATCTCCCTTTCCACCTTGTTTGCAAAGGCATGGGAGTGCTCCAACTCTCGCTGTTTGGAAGTTCACACAGCCTTCTTGATTTTGCTTATAACTTCTGTATACTCCTTTTTCTTCGATAAAGAAGTGAAAGAGAAACCAGATGCATGTATTCTGGTTTCGTCTGCAGCATTTGCTATCATGTCACTAGGCTTGTCAAGATTTGGATTCGAGGTTGATCTCCTATATTTTTTCAGTGGATTTCTGATAGTACAACTCATGAAAATAAAATTATGGTTAGTAGTTGTTGGAGGGAGTTTCAGTTATTCCCTCCTCATTTTTCGTTCGACCTTGGATGCTTCAGCAAGAAGTGGGCATGTTGGACTCAATGTCCTAGATCACGTAGTCATTGAAATTGGTTCACACTCTCAAGGAACTAGCCGTAATTTTTCACATGTTGATTCACCTCAAACTATTACCACTGCCACTGGTATTGGTAATTCCCTCATCATGCCACAAGAGGTTGTTGTCCCTCAAGGAGACGAGGATTCAGGATTCATAGTCACCCAAGGAAAAAATGACAGTAACAAAAGTATCATGGCTAGATTCATGGAATGTATAGAGGTGCTTAAGAAGGAGAATGAGACCCTTATCAACACAATTTCGAAGCATGTAGATGGATACCTCAAAGCTAATGTGGTCAACAAGATTCCAGTGGTGGAACTCCATGCTGAAAACAACTTAGTGGTGGATGCATTGCCGGTAGGAATAATCAACGACCTTCATGAAACCACGTGGCTGATGTTGGCAGAAGGGTTTGAGGAGGATTGTTGCAGAGCATACTGTTATTGCCGAAGGGAGTTTCTGAAAGAGTGTCTATGGACATTTGGGTTGGAAATGCAAGAGCTCAGCATGGAGGATATCGATAAGATGGAGAAGATTCAAAGTTGGTCAACAAAGGCTTTGGATGTAGTTGATAGTGTACTTCTTCCCAATGAAAGGACACTCTGTGATCGCGTCTTTAAAGGGGTCTCTTCCTCTGGGGATTTTGCTTTCGCAGTGGTTTCTAGAGAATTGAATATTAGTCTGCTTCGCATTACTAATCACATGGCAACTTTTCTGGAGTGTGAAAAATTTACATATTATGAGGGTGGCGAGCTTCATCCTAATATCTCTGAATTGATGCACAAAATTCGTTATGTTTACACAAAAAGGGATAGTAGATCTAGGCAAGAAAAATACACCATGGTTGGTAAGGAGGGAAAGCTTTCACCGTCTGTGAACGTAGCAAGGGTAGTAGTAACAGGTCTGTTAGAGAGAATTTTGGAAGTGGAGTCCAAAAATTACCATAACCCTTCTCTGGGGTATGTTTTCGTCATGAACAATCTTAGTTTCATAGAACTAGAAGCAAAAATGTATGGATTGGTTCCAATTTTTGGTCATGATTGGCTCCGGAAAAACACAACAAAATTCCAACAAAACCTTGAACTCTATCTGAGAAGCTCGTGGAATAAGATTGTAGACTTTCTTAAACTGGATATCAGTGAATCAGAGACTAGTGTTGCAGTTGGGTTACTGAAAGACAACCTAAATTCCTTCAACGAACACATTGATGAGATATGCAATGTTCAGTCTACTTGGTTTGTCTTTGATGAAGAGTTAAGAAAACATATAATAAAGTCCATAGAAAACATCTTGTTGCCAGCATATGGAAACTTCATTGGAAGGTTGCAGAATCTTCTTGGTAAGCACACTTATTATTATATTAAGTATGGAATGTTTGACGTCCAAGATCGAGTCCACAATCTGTTTCTTGTAAGGAAGAATATGAATCAGTCTTTGTTACAGAAGGAAAAAACAACCTAG 2013 0.3944 MVIKIKSWLLQPKVWRFVSFISSIVGLFCYAFSSSFNHLCGDWTWWKIFLYIGFSLFISLSTLFAKAWECSNSRCLEVHTAFLILLITSVYSFFFDKEVKEKPDACILVSSAAFAIMSLGLSRFGFEVDLLYFFSGFLIVQLMKIKLWLVVVGGSFSYSLLIFRSTLDASARSGHVGLNVLDHVVIEIGSHSQGTSRNFSHVDSPQTITTATGIGNSLIMPQEVVVPQGDEDSGFIVTQGKNDSNKSIMARFMECIEVLKKENETLINTISKHVDGYLKANVVNKIPVVELHAENNLVVDALPVGIINDLHETTWLMLAEGFEEDCCRAYCYCRREFLKECLWTFGLEMQELSMEDIDKMEKIQSWSTKALDVVDSVLLPNERTLCDRVFKGVSSSGDFAFAVVSRELNISLLRITNHMATFLECEKFTYYEGGELHPNISELMHKIRYVYTKRDSRSRQEKYTMVGKEGKLSPSVNVARVVVTGLLERILEVESKNYHNPSLGYVFVMNNLSFIELEAKMYGLVPIFGHDWLRKNTTKFQQNLELYLRSSWNKIVDFLKLDISESETSVAVGLLKDNLNSFNEHIDEICNVQSTWFVFDEELRKHIIKSIENILLPAYGNFIGRLQNLLGKHTYYYIKYGMFDVQDRVHNLFLVRKNMNQSLLQKEKTT* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01882 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 295 420 IPR004140 GO:0000145|GO:0006887
Lapu8g01882 670 Gene3D Exocyst complex component Exo70 235 427 - -
Lapu8g01882 670 Gene3D Exocyst complex component Exo70 428 661 - -
Lapu8g01882 670 Pfam Exo70 exocyst complex subunit 473 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu8g01882 670 SUPERFAMILY Cullin repeat-like 264 653 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01882 Lapu-Chr8 36295223 36297360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01882 297 653 EXO70 exocyst subunit family AT1G07000 30.626 4.74e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01882 - - var:108336660 1087.4