Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01881 ATGCTTCATGGTTGTATAGAGGCTCTTAAGAAGGAGAGTGGGAGCGTTATCAGCACAATTTCCATGCATGTAGACAAATACCTTAAAGCTAATGTTCTCAGTGAGGACCAGATTTCGGTGCCAAAATTGCATGGCGACGATAACATGTTGGTTGATTCATTGTCGTCAGGAATTATCAGCAACCTTCGTGAAAGTGTAGACAAGATGGTGTCTGGTGGATTGGAGAAGGAATGCCTACACATGTACAGTAATTGGCGGAGGGAGTTTCTGAAAGAGAGTCTATGGACGCTAGGGTTGCAAGATCAAGAACTCAACATGGAAGACATTGACAAAATGGAGAAGATTGAGAACTTGATAAAAGCTATGAACATAGCTGCGAGAATACTCTTTCCCAATGAGAAGAGACTCTTCAATCGTATCTTTAGAGGCTCCCTTTCCTCTTGGGAGATGATAGAGCTTTTAGAGAGCAGTTTGGAAGCGAACTCCAAAAATTACAAAAACCCTACTTTGGGTTATGTTTTCATCATGAACAACCGGAGATTCATAGGAGCAGAGACAACACTGAATGGACTGGTACCTATTTTTGGAGATGACTGGCTCCATAAAAACACAAAAAAATTCCAACAAAACCTTGAACTCTATTTAAGAAGCTCATGGAATAATATTGTGGACCTTTTGAAGCCAGGCATCAATCAACTAGAGCCTAGTGTTGCAGCCGAGGTGATGAAAGACAACCTTTATTGGTTCAAAGAACACTTTGATGAGACATGCAACGTTCAGTCTGCATGGTCCGTCTGTGATGAGGAGCTAAGGGAACGAATAATAAAATCCATAGAGAACATCCTGTTACCAGCATATGGAAGTTTCCTTGGGAAATTTGAAGAATTTCTTGGGAAGCATGCGTATGAGTACATTAAGTATGGAATGTTTGAGGTTCAAAATCGACTCAACAAACTGTTTCTTGTAAGGGAGTAG 975 0.4082 MLHGCIEALKKESGSVISTISMHVDKYLKANVLSEDQISVPKLHGDDNMLVDSLSSGIISNLRESVDKMVSGGLEKECLHMYSNWRREFLKESLWTLGLQDQELNMEDIDKMEKIENLIKAMNIAARILFPNEKRLFNRIFRGSLSSWEMIELLESSLEANSKNYKNPTLGYVFIMNNRRFIGAETTLNGLVPIFGDDWLHKNTKKFQQNLELYLRSSWNNIVDLLKPGINQLEPSVAAEVMKDNLYWFKEHFDETCNVQSAWSVCDEELRERIIKSIENILLPAYGSFLGKFEEFLGKHAYEYIKYGMFEVQNRLNKLFLVRE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01881 324 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 143 IPR004140 GO:0000145|GO:0006887
Lapu8g01881 324 Pfam Exo70 exocyst complex subunit 150 317 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu8g01881 324 SUPERFAMILY Cullin repeat-like 149 320 IPR016159 -
Lapu8g01881 324 Gene3D Exocyst complex component Exo70 2 147 - -
Lapu8g01881 324 Gene3D Exocyst complex component Exo70 148 324 - -
Lapu8g01881 324 SUPERFAMILY Cullin repeat-like 34 145 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01881 Lapu-Chr8 36291776 36294132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01881 147 320 EXO70 exocyst subunit family AT5G58430 44.751 3.23e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01881 - - pvu:PHAVU_008G252300g 493.426