Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01880 ATGTCCGAAAACGGTGAAGAGAAGTTACTCGCTGTGGCGCGGCACATAGCAAAGACGCTGGGCCACAACAACACCATGTCTGATGACATTTTCCAAATATTGTCCAACTTCGATGGAAGGTTCTCCAGAGAGAATCTTTCTGAAAAGGGTGTAGATGCGGATTCCAGAGCCTGCGCCGCACTCGATCATTCCCTCAAATCCCTTGACCACCGGATCTCTCACTACGTCTCCTCCGACCGTCCAATCTGGGCCGACGCCTCCCACGCCGCTGCCTTCCTTGACGCCGTGGACGAGCTCGTCGCCGCTGTTGCCGAGTGGAACCACCTCGCCTCCGACAAGTCTGTCGCCGCCTGCCTCGTACGCGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGCACTCTCATGGAGCGCGGCGGGGAGTCGTTCGGCCTCACTAGGAGCTACCGCAATGGCGAGTCGACCGAGAACATGCCGTTCGAGTCGGAGGAAGAAGACGAGGAGGAAGACGAAGCGAGAAACGGAGGAGACGACGAGCAGATTCCAGTGGCACTGCCGGTCACCGACTTTGACATCGTCATCGACGCGCTTCCGTCAGGGACGATCAACGACCTCCATGAGATCGCGAAGAGAATGGTGGCCGGCGGGTTCGGGAAGGAGTGCTCTCACGTGTACAGCAGTTGCCGGAGGGAGTTTCTGGAGGAGAGCGTGTCGAGGTTAGGGTTACAGAAGCTCAGCATCGAGGATGTTCACAAGATGACGTGGCAGGACCTTGAAGATGAGATTGAGAGATGGATTAAAGCCTCCAACGTCGCTCTCAAGATCCTCTTCCCCAGCGAGCGTCGTCTCTGCGACCGCGTCTTCTTCGGATTTGCCTCCGCAGCGGATTTTTCCTTCATGGAGGTTTGCCGTGGATCCGCGATTCAGTTGCTGAATTTCGCGGACGCCGTCGCGATCGGGAGCCGGTCGCCGGAACGTCTGTTCAGAATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCTGAATTTGAGGCTCTGTTTTCTGATCAGTTCAGCGTGTCGCTCAGGAACGAAGTGATCACGATTTGGAAGAGGTTGGGGGAATCGATTAGAGGCATTTTTATGGAGCTGGAGAATTTGATTCGCCGGGATCCAGCGAAGACGGCGGTTCCGGGTGGCCGGGTTCACCCTATTACTCGCTACGTGATGAACTACCTCCGTGCGGCGTGCAGGTCACGGCAGAGCTTGGAGCAGGTTTTTGAAGACTACGGGTTGAAAGAGTACCCGAAGCTTGATGATAGAGTTCCCTCGTCTTCTTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTGTTAGAGAGCAATTTGGAAGCAAAATCCAAAATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTATATTGTTCAAAAGAGCAGAGATAGTGAACTGGGAACCCTCTTGGGAGATGATTGGATCAGAAAACACGCTGCAAAAGTTCGACAATTCCATGGACACTATCAAAGAAGCTCGTGGAGTAGGGTATTGGGGATTCTGAAGCTGGATAGTAATGCCTCAGTGCCCCCTAATGGCTTGGCAAAGTCAATGAGGGAGAAGCTCAAGTCTTTTAACACTATGTTTGATGATATTTGCAAGGAACAGTCTTCTTGGTTTGTTTTTGATGAACAGCTCAGGGAAGAAATAAGAATTTCGCTTGAGAAAATCTTGTTGCCTGCATATGGAAACTTCGTAGGTAGGTTCGAGAATGTTCCAGAGATTGGTAAGCATGCTGATAAGTATATCAAGTATGGAACAGAGGACATTCAAGCTAAACTCAACGAATTGTTTCAAGGATCATCAAATGGTAGCCGAAAGTGA 1911 0.5175 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGVDADSRACAALDHSLKSLDHRISHYVSSDRPIWADASHAAAFLDAVDELVAAVAEWNHLASDKSVAACLVRAEDMLQHAMFRLEDEFRTLMERGGESFGLTRSYRNGESTENMPFESEEEDEEEDEARNGGDDEQIPVALPVTDFDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEDVHKMTWQDLEDEIERWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFEALFSDQFSVSLRNEVITIWKRLGESIRGIFMELENLIRRDPAKTAVPGGRVHPITRYVMNYLRAACRSRQSLEQVFEDYGLKEYPKLDDRVPSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKSRDSELGTLLGDDWIRKHAAKVRQFHGHYQRSSWSRVLGILKLDSNASVPPNGLAKSMREKLKSFNTMFDDICKEQSSWFVFDEQLREEIRISLEKILLPAYGNFVGRFENVPEIGKHADKYIKYGTEDIQAKLNELFQGSSNGSRK* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01880 636 MobiDBLite consensus disorder prediction 163 180 - -
Lapu8g01880 636 Pfam Exo70 exocyst complex subunit 268 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu8g01880 636 MobiDBLite consensus disorder prediction 151 185 - -
Lapu8g01880 636 Gene3D Exocyst complex component Exo70 82 636 - -
Lapu8g01880 636 SUPERFAMILY Cullin repeat-like 83 627 IPR016159 -
Lapu8g01880 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 60 629 IPR004140 GO:0000145|GO:0006887
Lapu8g01880 636 FunFam Exocyst subunit Exo70 family protein 75 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01880 Lapu-Chr8 36284942 36287814 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01880 1 635 EXO70 exocyst subunit family AT5G58430 69.231 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01880 K07195 - gmx:100803694 1101.66