Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01877 ATGTCGACAACCATAACCTCGAATACCACCTCGTCCTCAAACACAAGTATATGGATTTGCGAACGTACAACAAGGTTCCAAACTTATTCAAAAGGAATATTCTTCGGCGAAAACCCTTTAAACTACACGCTGACAGCGATCGCTTTTCAGGTCTCCTTAGCCTGTTTGTCCACCTCATGTTTGGAACTCATTCTTGTCCCGCTCGGGGAGACTACCTTCACTCCCCAAATTCTGGCAGGGTTACTATCGGGACCAACAGTTTTGGGAAAATTTTCAAAACTTAGACAGTCCCTGTTCGCCTCAAGACCTTTGTACGCAATTGAGGTACTCTCTCTTTTCGGGACGATGATGTTCCTGTTCTTGGTGGGAGTGAAAATAGATCCATCTCTAGTTTTGAGAACAGGGAAAAAGACTTGGGCCATTGGCTTGTGTTCTTGTCTATTGCCACTCCTCCTTAGCGTATCTTACGCTTTTACTCTAAGGCAATTTTTGTCCCCGGAATCAGGCATCTACAAGTCCCTATATTTTGTTGCAGCTTTCTCATCAACTGGTTCCTTTCAAGTCACTGCTAGTATATTACAAGACTTTAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCAATCTCTGCATCTATGATAAATGGAATGTTCTGTGCGCTGTGGCAGGGCGTTTTAGTCTCACAAAGTCAAAAAGCTGAGCTGAAGCACAGAGAAACATCTTCCTCAATGATGGGCATCTGTTTGATTTTGATGGTGCTTGTTATCCTATGTGTTTTGAGACCTATCATGTTCTGGATGATACGCATGACACCCAGAGGGAAACCCATCAAAGAGACCTACATAGTTTCCGTCTATCTTATGGTGTTGGGGTGTTCACTATTTGGCGAGATCATGGGGGAGCACTACCTGATTGGGCCATTGATTCTTGGTCTAGCAGTGCCAGAAGGACCACCTCTTGGATCGGCATTGGTAGAGAGGCTAGATACCTTGATCTCGGCAGTGTTTATGCCATTGTTCTTCTTCTCTACCAGTACGAGATTCAAGGGCGATCTAGTTGATCTCCATGGCTTTTCAATCGTACAGCCTTTGGCCATAACTAACTTCTTTGGCAAGTTTGTGGGAACCGTGTTGCCCTCACTCTACTGCAAGATACCACTCGCTGATGCACTCTCCTTAGGTCTCATCATGAGTGCCCAAGGCATGACACAGTTGCTTCACTTGCAAAATTTACAATACTTTCATATTATAGATGATAGAACCTACGCTCAAATGGTGATTGCTTTAATATGGTTGACAGCAGCTTCCAGTCCTATAGTGAAATTCTTCTATGACCCATCTAAAAGTTACTTGTCTCTAACAAGGAGAAGGACCATTGAGCATGCTCCTCGCGACGTTGAACTTCCCTTGATAGCATGCATACACTGTGAAGAAAACACCCCATCCATGATCAATTTTCTTGAAATGTCTAGCTCCAGCGCTGAAAGTCCCGTTTGCTTCCATGTTCTACACCTGCTTAAACTGAAAGGTAGAGCAATCCCAGTTTTGATAGATCATGAGAACACTAGCAGGACCAAGCCATTGCACTCTAAAATTTCAAATGACATAGTAAACGCCTTTAAATCATACGAGCAACAAAACATTGGCAACGTGAAGGTGAAACTCTACACATGTATCTCCCCTTATGAGACAATGCACGATGAGATATGCTTGCAGGCTGCAGAAAAAAAAGCATGCATGTTAATTGTGCCTTTTCACAGGCACTTTAGAGGAACTGGGGTTATAGAATTAGCAAACCCCGTTAGAGCATTGAACCGCCATTTGCTGAGAACCGCGCCTTGCTCCGTTGGAATCCTAGTTGAACGTGGGAGGTTGATTAGCAACTACCCTTTAACATCTGTGTCCTTTTATAGTGTTGGAATTATATTTATAGAAGGGCCAGATGACCGTGAAGCCTTGGCATATGCAATGCGCATGGCAGATCGCCCCACTTTAAAGGTCACACTGATTAGGTTGACGGAACCTCGCAGAAAAAGTAGACCTGTGATCAACAGGGACCCTGATGCTGAAATGGTTCACAAGTTTATGGTTAACTACCTCCAAATAAAAAGGCATGATTACAGAGAGGAAGTGGTGAGAGATAGTGAAGAAATAGTCGGTGTCATAAGGGCACTTGAAGGTTGCTATGATTTGATTTTGGTTGGTAGACGCCATGAGAGTGAGTCTTCATTGTTTTATGGAATGAATGAGTGGAATGAGTACCCAGAACTTGGCGCTGTAGCAGACATGTTGGTGTCTTCAGATTCTACGTTTGATGGGTCAGTGTTGGTGGTGCAGCAACAAAATAAGGTAGCGTCAAAGGTTGGTCACCATGATTACTATCTAGAAAGTCCTGTCACCAGGCAAGAAATCCAAACCATTTTGGAAGTGCAGCCTAAGACAAGGGTGTGGCCAGTTATTTAA 2460 0.4374 MSTTITSNTTSSSNTSIWICERTTRFQTYSKGIFFGENPLNYTLTAIAFQVSLACLSTSCLELILVPLGETTFTPQILAGLLSGPTVLGKFSKLRQSLFASRPLYAIEVLSLFGTMMFLFLVGVKIDPSLVLRTGKKTWAIGLCSCLLPLLLSVSYAFTLRQFLSPESGIYKSLYFVAAFSSTGSFQVTASILQDFKLLNSEVGRLAISASMINGMFCALWQGVLVSQSQKAELKHRETSSSMMGICLILMVLVILCVLRPIMFWMIRMTPRGKPIKETYIVSVYLMVLGCSLFGEIMGEHYLIGPLILGLAVPEGPPLGSALVERLDTLISAVFMPLFFFSTSTRFKGDLVDLHGFSIVQPLAITNFFGKFVGTVLPSLYCKIPLADALSLGLIMSAQGMTQLLHLQNLQYFHIIDDRTYAQMVIALIWLTAASSPIVKFFYDPSKSYLSLTRRRTIEHAPRDVELPLIACIHCEENTPSMINFLEMSSSSAESPVCFHVLHLLKLKGRAIPVLIDHENTSRTKPLHSKISNDIVNAFKSYEQQNIGNVKVKLYTCISPYETMHDEICLQAAEKKACMLIVPFHRHFRGTGVIELANPVRALNRHLLRTAPCSVGILVERGRLISNYPLTSVSFYSVGIIFIEGPDDREALAYAMRMADRPTLKVTLIRLTEPRRKSRPVINRDPDAEMVHKFMVNYLQIKRHDYREEVVRDSEEIVGVIRALEGCYDLILVGRRHESESSLFYGMNEWNEYPELGAVADMLVSSDSTFDGSVLVVQQQNKVASKVGHHDYYLESPVTRQEIQTILEVQPKTRVWPVI* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01877 819 PANTHER CATION/H + ANTIPORTER 26 781 - -
Lapu8g01877 819 Gene3D - 492 762 - -
Lapu8g01877 819 Gene3D - 45 448 IPR038770 -
Lapu8g01877 819 Pfam Sodium/hydrogen exchanger family 73 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu8g01877 819 CDD USP_Like 645 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01877 Lapu-Chr8 36075099 36078312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01877 12 804 Antiporter Super Family AT2G13620 33.937 3.50e-146 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01877 K26731 - gmx:100790969 1118.61