Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01876 ATGGCTTCTTCTACTGGTAGTTTGGACACCTCTGCAAATGCAAACTCCTTCACCAACTTCACCTTCTCCACACACCCCTTCATGACCACTTCCTTCTCTGACCTCCTTGCCTCTCCCACAGACAACAACAAGTCTCAGGGTGGCTTGTCTGAGAGAAATGCCTCTGGTGTGCCCAAATTCAAGTCCACTCCACCTCCTTCTTTGCCTCTTTCCCCTCCTCCCATTTCTCCTTCTTCTTACTTTGCTATTCCACCTGGTTTGAGTCCTGCCGAGCTTCTTGACTCTCCTGTTCTCCTTAACTCTTCTAACATATTGCCATCTCCAACAACTGGAGCATTTACTCAGAGCTTCAATTGGAAGAGTAGTTCAGGGGGAAACCAGCAAATTGTCAAAGAAGAAGACAAAAGCTTCCCAAATTTCTCTTTCCAGACCCAGTCAAGGCCTCCTGCTTCATCCATAGTAACATATCAATCTTCAAATGTTGCCGTTCAAACACAACATCCATGGAATTTTCAGGAGGCCACAAAGCAAGATAATTTTTCTTCTGGGAAGAGTATGATGAAAACTGAAAACTCTTCTTCCATGCAGAGTTTTTCCCCTGAGATTGCTAGTGTCCAAACTAACCATAATAATGGGTTTCAATCAGATTATGGCAATTATGCCCCTCAATCTCAGACCTTAAGCAGAAAGTCAGATGATGGATACAATTGGAGGAAATATGGCCAAAAACAAGTGAAAGGGAGTGAAAATCCAAGAAGTTATTACAAATGTACATACCCCAATTGCCCTACGAAGAAGAAGGTTGAGAGGTCTTTAGATGGACAAATTACTGAGATAGTTTACAAGGGTACCCATAACCATCCCAAGCCTCAAGCTACCAGGAGAAACTCATCATCTTCCTCTTCTCTTGCAATCCCACCTTCAAATCCCATTAGCACTGAAATCCAAGACCAATCATATGCTACTCATGGTAGCGGACAAATGGATTCTGCAGCCACCCCAGAGAACTCATCAATATCAATGGGAGATGATGATTTTGAGCAGAGTTCTCACAAGTGTAAATCAGGAGGAGATGAGTATGATGAAGATGAGCCTGATGCAAAAAGATGGAAAATTGAGGGAGAAAATGAGGGTATCTCAGCGCCTGGTAGTAGAACAGTGAGAGAACCTAGAGTTGTGGTTCAGACAACCAGTGACATTGATATCTTAGATGATGGCTACAGATGGAGAAAATATGGGCAGAAAGTAGTGAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGCACACACCCAGGATGTCCCGTGAGGAAGCACGTGGAAAGAGCTTCACATGACCTAAGGGCTGTGATCACAACCTATGAGGGAAAGCACAATCATGATGTCCCTGCAGCCCGTGGCAGTGGTAGCCATTCTGTCAACAGACCCCTGCCAAATAATCCTGCAAACCCAACCACTGCAGCCACTGCCATAAGACCATTGCCAGTGATCCATCACACTGACAATTCCGTTCAAAGTCAGAGGCCACAAGCACCACAAGAAGGGCAATCACCCTTCACCCTAGAGATGCTACAAAGTCCTGGAAGTTTTGGATTCTCAAGTTTTGGGAATCCAATGGGGTCTTACATGAATCAGCAGCAATTATCTGACAATGTTTTCTCCTCCAGAACCAAGGAGGAGCCCAGAGATGATGTGTTCCTTGAGTCTCTACTATGCTGA 1719 0.4468 MASSTGSLDTSANANSFTNFTFSTHPFMTTSFSDLLASPTDNNKSQGGLSERNASGVPKFKSTPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNSSNILPSPTTGAFTQSFNWKSSSGGNQQIVKEEDKSFPNFSFQTQSRPPASSIVTYQSSNVAVQTQHPWNFQEATKQDNFSSGKSMMKTENSSSMQSFSPEIASVQTNHNNGFQSDYGNYAPQSQTLSRKSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSSSSSLAIPPSNPISTEIQDQSYATHGSGQMDSAATPENSSISMGDDDFEQSSHKCKSGGDEYDEDEPDAKRWKIEGENEGISAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNPANPTTAATAIRPLPVIHHTDNSVQSQRPQAPQEGQSPFTLEMLQSPGSFGFSSFGNPMGSYMNQQQLSDNVFSSRTKEEPRDDVFLESLLC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01876 572 ProSiteProfiles WRKY domain profile. 398 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 SMART WRKY_cls 231 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 SMART WRKY_cls 403 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 Gene3D WRKY domain 390 456 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 MobiDBLite consensus disorder prediction 33 52 - -
Lapu8g01876 572 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 FunFam WRKY transcription factor 222 291 - -
Lapu8g01876 572 FunFam WRKY transcription factor 33 390 456 - -
Lapu8g01876 572 MobiDBLite consensus disorder prediction 281 366 - -
Lapu8g01876 572 MobiDBLite consensus disorder prediction 209 235 - -
Lapu8g01876 572 MobiDBLite consensus disorder prediction 33 73 - -
Lapu8g01876 572 MobiDBLite consensus disorder prediction 459 487 - -
Lapu8g01876 572 MobiDBLite consensus disorder prediction 290 344 - -
Lapu8g01876 572 Pfam WRKY DNA -binding domain 404 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 Pfam WRKY DNA -binding domain 232 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 SUPERFAMILY WRKY DNA-binding domain 230 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 MobiDBLite consensus disorder prediction 345 366 - -
Lapu8g01876 572 ProSiteProfiles WRKY domain profile. 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 MobiDBLite consensus disorder prediction 209 231 - -
Lapu8g01876 572 Gene3D WRKY domain 217 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu8g01876 572 MobiDBLite consensus disorder prediction 472 487 - -
Lapu8g01876 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 498 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01876 Lapu-Chr8 36063273 36066582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01876 57 571 WRKY Transcription Factor Family AT2G38470 46.442 1.31e-117 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu8g01876 WRKY 1.6e-25 CL0274