Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01870 ATGCTTGAGAAGTGCAAGGGAATGTTCACAGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACTATGGCAAAGGTCATTGCTAAATCATTCCCAAAGATGCAATGCATTGTATTAGATCTCCCACATGTTGTTGCTGGCTTGCAAGGTAGTGAAAACCTAAAATACGTTGGAGGCGACATGTTTGAGGCCATTCCTCCTGCTGATGCCATTTTGTTGAAGATAACCCCAGTTTCGGGATTAAGATCTCTCATTGAGATCTATCCATAG 276 0.442 MLEKCKGMFTGLESLVDVGGGTGTMAKVIAKSFPKMQCIVLDLPHVVAGLQGSENLKYVGGDMFEAIPPADAILLKITPVSGLRSLIEIYP* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01870 91 Pfam O-methyltransferase domain 3 76 IPR001077 GO:0008171
Lapu8g01870 91 PANTHER O-METHYLTRANSFERASE 2 77 IPR016461 GO:0008168
Lapu8g01870 91 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 91 IPR016461 GO:0008168
Lapu8g01870 91 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 76 IPR029063 -
Lapu8g01870 91 Gene3D Vaccinia Virus protein VP39 1 78 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01870 Lapu-Chr8 35994964 35995949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01870 1 76 Monolignol Biosynthesis Gene Families AT5G54160 47.368 1.44e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01870 - - vra:106763376 143.28