Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01856 ATGTTTGGACATCAAGATATAGATAGATTAGATGAAATAACAAAGGTGAGAGCAGAGGTAGAAGCATCTTCTCAAATGGGAAGGAAGCATTTCTATGGTCCAACTCCTGGGACAACCTTAAACACAGTAACCCCTTGTGCTGCATGCAAGCTTTTGAGAAGAAGGTGTGCTGAAGAATGTCCTTTCTCTCCTTATTTTTCACCACATGAGCCTCAAAAGTTTGTAGCCGTTCACAAAGTGTTTGGTGCAAGCAATGTATCCAAGATGCTTCTGGAGGTACCAGAGGGCCAGAGAGCTGATGCAGCAAATAGCCTTGTTTACGAAGCTAACTTGAGGCTGAGAGATCCTGTGTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCAGAACTAAATGCAATAAGGGCAGAGATACTAAAATACAAATATAGAGAGGCTGCGAGTCTCATTTCTTCTAATCATGTAGCTTTGGTTTCTTCTGCTGATGCAATATCAGCAGCAATTCCCGCAAACTCACAACCACATGGTCTTTCTCAACCTCCTCCTCCACCAAAACCATTGCCTTCCCCTTCTGTTATCCTTTCATCCTTCTCTTCATCTTCAACTTCTTCTGTGTACACTCCTCCTAAAAGCTCAATGAGCCTTGGATCCATTTCCAGCACTGAAAATGTCCCATACTTTGTTTAA 708 0.4237 MFGHQDIDRLDEITKVRAEVEASSQMGRKHFYGPTPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFVAVHKVFGASNVSKMLLEVPEGQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQAELNAIRAEILKYKYREAASLISSNHVALVSSADAISAAIPANSQPHGLSQPPPPPKPLPSPSVILSSFSSSSTSSVYTPPKSSMSLGSISSTENVPYFV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01856 235 ProSiteProfiles LOB domain profile. 44 145 IPR004883 -
Lapu8g01856 235 MobiDBLite consensus disorder prediction 198 235 - -
Lapu8g01856 235 Pfam Lateral organ boundaries (LOB) domain 45 141 IPR004883 -
Lapu8g01856 235 Coils Coil 124 151 - -
Lapu8g01856 235 MobiDBLite consensus disorder prediction 182 197 - -
Lapu8g01856 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 41 189 - -
Lapu8g01856 235 MobiDBLite consensus disorder prediction 177 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01856 Lapu-Chr8 35810634 35811734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01856 26 158 AS2 family AT2G30340 79.851 1.78e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01856 LOB 2.4e-40 No_clan