Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01847 ATGGGGAACAATAGGTTTAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGTAGATCAAGAAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACAACATCTCAAAGGTCGCTGCCAAGATATTCACACTATTTCTCCTCTGAGCCGATCAGACCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTGGGCATGCCATTCACTGATTCACCTAGAAGGTCATCCAAGAGAAGGACTAGGAGAAAAACCATTTACAAGCCTTCTCCGACAGTTGTCTCTTCATCTTTGCTACCAACTTCCAACTATGACTTCACCAATCATTGGATCAAACCATACCAAGTTCAGTCAACAGATTATGACGTGTCTTCAGTTGAAAGCTCTTCTGAGTCTGATCTCCATGAATATGCTTATTCTGAGTCTGAATGTGACAGTTTTTCTGTTCCTGATTTACTTAATGGAATGGCCTCCAATGGCAGCTGCAGAGTTAGCTCATCCACTAATGACATCATCATTGACATGAACAACGAGTCCTTCCTTGAGAACTCTGAAAACCAAGATGGGTTTGATGCAATTTCACAGCTAGGTCTTGCTCCAATATTGACAAAGCCAATGAAGTTTGATGACAAGGTCATTGAGGCCACTGATTTGAGAAGTTCAACTGAATGGAATGAGCTGCAGGATGATCAGTCTTTTTCAATTGAAATCAACAAAGAGGAAGGCAATAGAACTCAAAGGAGGAGAAAAAGCAGTCATAGAAAGCCCTTCGCTAATTCTTCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATTCAAGCCTGTGCAAGAAGGAGTGTATCATCCACTGCAAGCAAAGCTTCAAGGGGTACGGGCTTTCCGGATGGCTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGAGCATCGAAAGATTTGGAGGACCTACTTGCCTGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTTAAAATGTAA 1143 0.4112 MGNNRFKLSDMMPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLPRYSHYFSSEPIRPGKLYNTPIHTKDLGMPFTDSPRRSSKRRTRRKTIYKPSPTVVSSSLLPTSNYDFTNHWIKPYQVQSTDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGMASNGSCRVSSSTNDIIIDMNNESFLENSENQDGFDAISQLGLAPILTKPMKFDDKVIEATDLRSSTEWNELQDDQSFSIEINKEEGNRTQRRRKSSHRKPFANSSGIRLRINSPKLASRKIQACARRSVSSTASKASRGTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSSEYHDLIVKAFEQIWFDLAQLKM* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01847 380 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Lapu8g01847 380 MobiDBLite consensus disorder prediction 27 96 - -
Lapu8g01847 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 376 IPR038933 GO:0045892
Lapu8g01847 380 NCBIfam uncharacterized plant-specific domain TIGR01568 313 376 IPR006458 -
Lapu8g01847 380 MobiDBLite consensus disorder prediction 246 271 - -
Lapu8g01847 380 MobiDBLite consensus disorder prediction 35 53 - -
Lapu8g01847 380 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Lapu8g01847 380 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01847 Lapu-Chr8 35729964 35731391 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu8g01847 Ovate 3.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01847 - - gmx:100780926 640.573