Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01846 ATGAAGGAAAACCTCATGGGAGAACATTGTTATGTAGAAACCGATCCAACTGATCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTCCTTGGAATTGAGGTAGCATGGAACCAAGTCAGACTCAATGAAGCGCTTCGCACCCCGGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGCACCCTCAAACATCAGTCCATAATAAGATTCTACACTTCTTGGATTGATGTTGATAACAGGACCTTCAACTTTATCACAGAATTGTTCACATCAGGGTCACTGAGAGAATACAGGAAGAAATATGAGCATGTCAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGCCATGATCCACCAGTGATTCACAGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTTGCTGCAATTCTCCGTGGATCCCAATCAGCACACAGTGTCATTGGTACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCTTACAGTGAATGTTCTAATCCAGCACAAATTTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTTCGGATTGAAGACATGGAAGCACAAAGGTTTATTGGAAAATGCTTGCTACCTGCGGAAAAGAGGCCTTCGGCAAAAGAATTGCTGCTTGACCCGTTTCTTGTATCTGATGATCCATCATCAACAACGAAATTTGCAATTCAGAAGCCATTTTTAAATGCCACCGAGATGGAGAAACTACAATTAAATGAGGATCTTCCGAGGACAGGAATGAAAGTGATTGGAAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGAATGGTTCTGTTAGGAATGTATTCTTCCCCTTTGACATTTTCAATGACACCCCTATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTTCTGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGCTACCTGAGAGGAGGCAAAGTAGCTGTTCAGATGCCTTCCATACATTCAGTTATATAGATGATGATTGTGATGACAATGATGCTCCTCATCATCATCTCCGCTCGTTCTCTTCAAGTTCATCATTCCAAGAATCAATGCCAGATTTTGTCAGTAAAGCTGAGGAAATATCAAGTGGATATTATTGGCTCCATGATGATTCGCATGATGATACCAGTTCACGATGCTCTTCACAGGGGACATATTCCAACTTGAATTACTCTTCTGTGGATGATCATCAAGATCAGTACAACGTGCCTTCTTTCAGAAAAGATAAACTTCCCATCATAAAGAGTCACAGCACGAGCAAAAAGGTTTCACCTGGCGAAGACTTAAGCAATTTTAACCAATGTAAACTCATGGTAGGATCACAGGTTCCTTTTACTAGTAAAAGTAAGATGATGATGAACAACCACAGATTAACAAGGAACAGATCATTGATTGATATAAGGAGCCAACTATTACACCGATCACTAGTTGAGGAGGTAAACAAAAGAAGATTGTTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACAACAGCATGCATCTGCTGCTCCTAAGAGGGGTAAGGGGGAAAAAAATAAGAGATGA 1830 0.4044 MKENLMGEHCYVETDPTDRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNRTFNFITELFTSGSLREYRKKYEHVSIQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGKCLLPAEKRPSAKELLLDPFLVSDDPSSTTKFAIQKPFLNATEMEKLQLNEDLPRTGMKVIGKLNPEDDTIFLKVQISDKNGSVRNVFFPFDIFNDTPIDVATEMVKELEISDWEPFEIANMIDREISALLPERRQSSCSDAFHTFSYIDDDCDDNDAPHHHLRSFSSSSSFQESMPDFVSKAEEISSGYYWLHDDSHDDTSSRCSSQGTYSNLNYSSVDDHQDQYNVPSFRKDKLPIIKSHSTSKKVSPGEDLSNFNQCKLMVGSQVPFTSKSKMMMNNHRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSQQHASAAPKRGKGEKNKR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01846 609 CDD STKc_WNK 19 279 - -
Lapu8g01846 609 Gene3D Phosphorylase Kinase; domain 1 6 102 - -
Lapu8g01846 609 FunFam probable serine/threonine-protein kinase WNK9 104 284 - -
Lapu8g01846 609 FunFam Probable serine/threonine-protein kinase WNK1 6 102 - -
Lapu8g01846 609 MobiDBLite consensus disorder prediction 586 609 - -
Lapu8g01846 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lapu8g01846 609 SMART serkin_6 21 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01846 609 Gene3D Transferase(Phosphotransferase) domain 1 104 285 - -
Lapu8g01846 609 Gene3D - 323 396 - -
Lapu8g01846 609 SUPERFAMILY Protein kinase-like (PK-like) 22 313 IPR011009 -
Lapu8g01846 609 ProSiteProfiles Protein kinase domain profile. 21 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01846 609 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01846 609 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01846 Lapu-Chr8 35723600 35728635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01846 11 589 MAP Kinase Kinase Kinase AT5G58350 59.691 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu8g01846 Pkinase 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01846 K08867 - gmx:100272203 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01846 8 35723600 35728635 Lapu8g01846 8 35723600 35728635 ECH
Lapu6g02073 6 20435013 20438916 Lapu8g01846 8 35723600 35728635 PCT