Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01844 ATGGCATTCCATGCATATTCCACTATGCTCCTTATTCTAATCTCTGTCTTTGCTGAAATGAACTTGCAGGGTGTCACTGCTATAGGTGGTTGGCAGGCTGGCCACGCTACTTTCTATACCGGTTCTTCTCAGTCCATGGGAGGTGCATGTGGTTACGGGGATGTGATCGGCCTGGGATATGGAACTGACACGACAGCTCTAAGCACCACTTTGTTCAACAATGGCTTGTCTTGTGGGGCATGTTTTGCAGTTATGTGTGTCCATGACCCAAGATGGTGCAAGCCTGGGTCGGTTGTTGTTACTGCTACAAACTTCTGTCCTCCCAGCAATAATGGTGCTGGTTGGTGCAACCCTCCTTCACAACACTTCAACTTGGCAGAATCAGCCTTCCTCAAAATTGCTCAGTATAGTGCTGGAATTGTGCCTGTGTCATTCAGAAGAGTGCCTTGTGTGAAAAAGGGAGGAATAAGGTTCACACTGAATGGACACTCTTACTTCAACCTGGTTTTGGTCACCAACGTCGCGGGTGCAGGTGATGTGCATGCGGTCTCCATCAAAGGGTCCAAAACTGGCTGGCAATCCATGTCAAGAAACTGGGGGCAAAATTGGCAGAGCAACTCCTACCTCAATGGACAAGGTCTCTCTTTTCAAGTCACCACTAGTGACGGTAAAACTGTCACAAGCTACAACGTGGCACCAGCTAATTGGCAGTTTGGTCAGACCTTCCAAGGGCTTCAGTTTTAG 744 0.4839 MAFHAYSTMLLILISVFAEMNLQGVTAIGGWQAGHATFYTGSSQSMGGACGYGDVIGLGYGTDTTALSTTLFNNGLSCGACFAVMCVHDPRWCKPGSVVVTATNFCPPSNNGAGWCNPPSQHFNLAESAFLKIAQYSAGIVPVSFRRVPCVKKGGIRFTLNGHSYFNLVLVTNVAGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQGLSFQVTTSDGKTVTSYNVAPANWQFGQTFQGLQF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01844 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 244 IPR007117 -
Lapu8g01844 247 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Lapu8g01844 247 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Lapu8g01844 247 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Lapu8g01844 247 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Lapu8g01844 247 PRINTS Expansin/Lol pI family signature 138 154 IPR007118 GO:0005576
Lapu8g01844 247 PRINTS Expansin signature 201 222 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 230 246 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 166 187 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 113 130 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 154 166 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 130 143 IPR002963 GO:0009664
Lapu8g01844 247 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Lapu8g01844 247 Pfam Expansin C-terminal domain 156 233 IPR007117 -
Lapu8g01844 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 155 IPR007112 -
Lapu8g01844 247 PANTHER EXPANSIN-A15 11 246 IPR002963 GO:0009664
Lapu8g01844 247 SMART dpbb_1 64 145 IPR007112 -
Lapu8g01844 247 Pfam Lytic transglycolase 64 145 IPR009009 -
Lapu8g01844 247 SUPERFAMILY Barwin-like endoglucanases 30 173 IPR036908 -
Lapu8g01844 247 Gene3D - 155 247 IPR036749 -
Lapu8g01844 247 CDD DPBB_EXPA_N 30 150 - -
Lapu8g01844 247 Gene3D - 16 150 IPR036908 -
Lapu8g01844 247 FunFam Expansin 155 247 - -
Lapu8g01844 247 SUPERFAMILY PHL pollen allergen 152 244 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01844 Lapu-Chr8 35700209 35701922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01844 7 247 Expansin Gene Family AT2G40610 69.880 2.08e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01844 - - gmx:100815150 382.104