Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01842 ATGCAAGATCCATCTTCAAACCCTAATTCCAATCCCAATCCTAATCCTCACAATGCCAATGCCGCATCCCAGCTGCCGCGACCGCCGCCGTCCACGGCGTCCACCGGCGCCGGCGCCGGCGTTTCCTCCTCCTCAATGTTCGCGCGTTCCGGCGGGTCTCACCACCGCCGAGCCCACTCGGAGGTGAGTTTCCGGCTTCCGGACGACATGATGGACCTGTCGCCGTCGGATCCGTTTGCCGGTGGGTCGTCGACGGCGAGTATGGAGGAGATCGGATCCGAGGACGACCTGTTTTCGACGTACATTGACGTGGACAAGCTTGGAGGAGCAAATGGGTCGAGCGGTGCGGGAAACGGAGCGGATCCGGCTGGAGAACGGGAGAAGAGTCCGACGAGGGCGCGGCACCGGCACAGTAGTTCCGTCGATGGCTCTTCGTCGTTTGGCGAAATTATGGAAGCGAAGAAGGCTATGCCTCCTGATAAGTTAGCTGAGCTGTGGACAGTTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCTAAAGAGAGAAAAGCACGCTATATACAAGAACTCGAGCGCAAGGTTCAAACACTTCAGACGGAAGCCACAACTCTTTCGGCCCAATTGACATTATACCAGAGAGACACAACAGGCCTGAGTACTGAAAATACAGAGCTTAAGCTCCGGCTGCAAGCCATGGAGCAGCAGGCACAGCTTCGTGATGCTCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAAGTTGCTACTGGTGAGATGATGAGCCACACTGAATCCTTTAATCTGGGAATGCACCATATGCCCTTTACAGGATCAACTTTCAGTCCAATCCTGTCACAATCAGGTCCTTCTGGTCACCAGAACATCCAGTTGTCACCATTTGGTCACTCCCCATCCTCAATGCCAACTCATCAACTGCATCAAACAAGTTCTCATCCACTATCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTCTGGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACGACATTTTGA 1110 0.5243 MQDPSSNPNSNPNPNPHNANAASQLPRPPPSTASTGAGAGVSSSSMFARSGGSHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGANGSSGAGNGADPAGEREKSPTRARHRHSSSVDGSSSFGEIMEAKKAMPPDKLAELWTVDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSHTESFNLGMHHMPFTGSTFSPILSQSGPSGHQNIQLSPFGHSPSSMPTHQLHQTSSHPLSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLSASESSTTF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01842 369 MobiDBLite consensus disorder prediction 349 369 - -
Lapu8g01842 369 MobiDBLite consensus disorder prediction 125 139 - -
Lapu8g01842 369 MobiDBLite consensus disorder prediction 1 147 - -
Lapu8g01842 369 FunFam probable transcription factor PosF21 170 223 - -
Lapu8g01842 369 Coils Coil 187 214 - -
Lapu8g01842 369 CDD bZIP_plant_RF2 172 221 IPR044759 GO:0003700|GO:0006355
Lapu8g01842 369 Gene3D - 170 222 - -
Lapu8g01842 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Lapu8g01842 369 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Lapu8g01842 369 MobiDBLite consensus disorder prediction 1 50 - -
Lapu8g01842 369 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 339 - -
Lapu8g01842 369 MobiDBLite consensus disorder prediction 292 326 - -
Lapu8g01842 369 Coils Coil 235 266 - -
Lapu8g01842 369 SUPERFAMILY Leucine zipper domain 171 222 IPR046347 GO:0003700|GO:0006355
Lapu8g01842 369 Pfam bZIP transcription factor 171 226 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01842 Lapu-Chr8 35682132 35685009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01842 1 369 bZIP Transcription Factor Family AT2G40620 52.206 2.17e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu8g01842 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01842 - - vra:106763153 594.734