Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01834 ATGTCCGTACGCTCAACACTAAACCTCCACCCCATGAACCTCGCCACCCCAATTTCCCATTTTGATGATAACCCACCATGCAAAACCAAGACCAAAACCCAAAGGAGGCTGCTTCGGATCATAATCACCGACCATGACGCCACTGATTCTGACTCCGACGATGAACAACAACAAAACAACCGAACAACAAGAAGAAAAGTGAAGAGGGAAATTACCCAAATCAGCATGCACCATCCTCTCCCTGACAACTCCTTTTCTTCTTGTTCGTATTCTTCTGCTTCAGCCTCTGCTTCCACTTGTTCATCCGAACAAGCCTCAAAGTGCAGCAGACCCAAAAAGCCGCCACAATCCTCCCAAGCGGCCCGCCGCGGCAGCAAGTTCCGCGGCGTCCGTCAACGGCCGTGGGGGCGGTGGGCCGCCGAGATCCGCGACCCCAACCGCCGGAAACGCCTCTGGCTCGGAACCTTCGACACGGCGGAGGAAGCCGCCAACGAGTACGACAAAGCCGCCGTCAAACTCAAGGGCCCCAACGCCGTCACCAACTTCCCCCTTACAGCGCCGCCTCCGGCGGCGGCGTCTCCCTTCACCACCATCGACAGCTTGAGCACCGACGGCGGCGCGTCGTACTCCGACTTGGTGGCCTCGCCGACGTCCGTTTTAACCTACGACTGCGAGTCGACGCCGTTCGACAGTTTCCATTACGGCGACGTGGACGCGCTCGGGTTCCACATCGACGCGCCGTTAAGTCTAGCCGACGTTGACGTCGCGCTGACGTGTCATGACGGGAAGGAGGAGGAGGCGTTCGATGAATTCGATCTGGACGAGTTCATGAAGTGGCCTTACTAA 846 0.5768 MSVRSTLNLHPMNLATPISHFDDNPPCKTKTKTQRRLLRIIITDHDATDSDSDDEQQQNNRTTRRKVKREITQISMHHPLPDNSFSSCSYSSASASASTCSSEQASKCSRPKKPPQSSQAARRGSKFRGVRQRPWGRWAAEIRDPNRRKRLWLGTFDTAEEAANEYDKAAVKLKGPNAVTNFPLTAPPPAAASPFTTIDSLSTDGGASYSDLVASPTSVLTYDCESTPFDSFHYGDVDALGFHIDAPLSLADVDVALTCHDGKEEEAFDEFDLDEFMKWPY* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01834 281 Pfam AP2 domain 125 175 IPR001471 GO:0003700|GO:0006355
Lapu8g01834 281 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 196 - -
Lapu8g01834 281 MobiDBLite consensus disorder prediction 102 123 - -
Lapu8g01834 281 MobiDBLite consensus disorder prediction 43 67 - -
Lapu8g01834 281 CDD AP2 125 183 IPR001471 GO:0003700|GO:0006355
Lapu8g01834 281 FunFam Ethylene-responsive transcription factor 2 126 184 - -
Lapu8g01834 281 PIRSF PTI6 7 281 IPR017392 GO:0003700
Lapu8g01834 281 Gene3D AP2/ERF domain 125 185 IPR036955 GO:0003700|GO:0006355
Lapu8g01834 281 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Lapu8g01834 281 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Lapu8g01834 281 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Lapu8g01834 281 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Lapu8g01834 281 MobiDBLite consensus disorder prediction 102 132 - -
Lapu8g01834 281 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01834 Lapu-Chr8 35587359 35589260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01834 28 232 AP2-EREBP Transcription Factor Family AT4G27950 43.810 4.51e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu8g01834 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01834 K13434 - gmx:100817278 357.836