Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01830 ATGTATCTTTCAAAGGGTTGTAGGTGTGAAGTTGTTCTCTGTTTTTGGTTTTGCTGCTATTTCCTATTGGCTGCTAGTAAGGTCACTGACCCCACAGAAGTTGAGGCATTGAGAACCATAAAGAGAAGTTTGATTGATATAAATGGAAATTTGAGCAGCTGGGATCGTGGAGACCCATGTACATCCAACTGGACAGGGGTTATGTGCTCCAATACAACATTAGTCGATGGCAATCTACATGTTCTACAATTGCAACTACTGAAGTTGAACCTGTCCGGAACTTTGGCACCAGAGATTGGCCACTTATCTTATTTGGAAATACTGGACTTTATGTGGAATGACATAAGTGGGAGTATACCAAAGGAGATTGGCAATATCAAAACTCTGAAACTCTTACTCCTGAGTGGAAATAAACTAACAGGAGGTCTGCCTGAAGAGCTTGGCCATCTTCCAATGCTGGACAGAATCCAAATTGACGAGAACAATATTACAGGATCCATACCACTATCATTTGCAAACCTGAACAGCACAAAACACTTCCACATGAACAACAATTCACTTAGTGGACAAATCCCAGCACAGCTTTCCAAATTAGGAAGCCTTATTCACCTTCTTCTTGACAACAATAACTTGACAGGAAATCTTCCATCCGAGCTCTCTGAAATGCCAAGCTTAACTATACTTCAACTCGATAACAATAACTTCAATGGAAATAGCATACCAGAATCTTATGCCAACATGTCAAAATTGTCGAAATTAAGCCTTAGGAACTGCAACTTGACAGGACCAATTCCTGATTTCAGCATGATACCACACCTTGCTTACCTTGACCTGAGTTTCAATCAGTTGAATGAATCAATTCCTACCAATAAGCTATCAGACAATATGACAACCATTGACTTATCAAACAACAAGCTCAATGGAACAATTCCATCCTACTTTTCTGGTCTTCCACGTCTTCAGAAATTGTCAATTGCTAACAATTCAATTAGTGGCACAGTTCCTTCTACCATTTGGCAGAACAGGACTTTAAATGCAACAGAGCAACTTATCTTGTACATGCAACATAATGAACTTACAAACATATCCGGCACTACAGATCTTCCTGCAAATGTCACACTTATGCTTGAGGGAAATCCTGTATGTTCGAATAATAACTCCTTAGTTCAGTTCTGTGGACCTGAAAGCGACAATGACAAGGATGGAGGCTCCAGTGTTGTCTGTCCAAGTCAAGGATGCCCCCCTTCTTATGAATACACCGTGGAATGTATCTGTGCTGCCCCATTGATTGTTCATTATCGGTTGAAAAGTCCAGGTTTTTCAGATTTCCGTGCATATGTGAAAGAATTTGAGAGCTTCCTGACAGATGGTCTTACTGTACATACAAATCAGCTGTTTATTGAGCGTTTTGCATGGGAGAAAGGGCGGTTGAGAATGAACTTGAAGCTTTTTCCAGAATATATTGACAATACAAGTTCTCTTGAATTCAGTACAGGTGAAGTTATTCGGATTAGGGACATGTTCAGAGAATGGGATATTCATGACAGCGACTTGTTTGGTCCTTATGAACTCATGGACTTCATTCTACTGGATCCTTACAGAGAGGCGATTACTCCCTCTTCAAGTTCAGGGATAAGCAAAGGTGCACTGGCTGGAATAATCTTAGGTGCAATTGCCTGTGCAGTTACGTTATCTGGAATTGTTTCCATTCTTATTTTGAGAATACGCTTGAGAGATTATCGTGCACTTTCCAAACGGCGTAACGTATCTAGGATCTCGATAAAAGTTGAAGGTGTAAGATCATTTGATTACAAAGAAATGGCCTTGGCCACAAACAATTTTAGCCAGTCTGCTCAAATTGGAGAAGGGGGCTACGGGAAGGTTTATAAAGGTCGTCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGTAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATACATGCCAAATGGAACCCTAAGGGATCACCTGTCTGCTTATTCAAAAGATGTTCTTAGTTTTTCTTTGAGGTTAAAGATTGCTCTAGGATCAGCAAAAGGTCTTCTATATCTACACACAGAAGCTGATCCTCCAATATTCCACCGAGACGTGAAGGCCAGCAATATATTATTGGACTCTAGGTACACAGCAAAAGTTGCCGATTTTGGACTTTCACGACTTGCCCCAGTTCCAGATATTGAAGGAAATGTACCTGGTCATGTATCCACAGTGGTAAAGGGGACCCCGGGTTATCTTGATCCGGAGTACTTCTTAACTCGTAATTTGACTGACAAAAGTGATGTTTATAGTCTGGGTGTTGTATTTCTGGAACTTTTGACTGGGAGGCCACCAATCTTTCATGGTGAAAATATTATTAGACAGGTTAATATGGCATACCAATCTGGAGGAATATCTCTGGTTGTTGATAAACGTATTGAGTCTTATCCATCTGAGTATGCAGAGAGATTTTTGACTTTAGCCTTGAAGTGTTGCAAAGATTCACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAATACATCTGTTCTATGTTACCTGAGTCAGATACCAAGGGAGCCGAATATGTTACAAGTGATTCTTCTGGTATACTATTCAGTTCACAACCTTCATCATCTACTATAAAGACTCCTTTTATTTCAGGAGACGTGTCAGGTAGTGACCTTATCAGTGGAACTGTACCAACCATCAAGCCAAGATAG 2835 0.4081 MYLSKGCRCEVVLCFWFCCYFLLAASKVTDPTEVEALRTIKRSLIDINGNLSSWDRGDPCTSNWTGVMCSNTTLVDGNLHVLQLQLLKLNLSGTLAPEIGHLSYLEILDFMWNDISGSIPKEIGNIKTLKLLLLSGNKLTGGLPEELGHLPMLDRIQIDENNITGSIPLSFANLNSTKHFHMNNNSLSGQIPAQLSKLGSLIHLLLDNNNLTGNLPSELSEMPSLTILQLDNNNFNGNSIPESYANMSKLSKLSLRNCNLTGPIPDFSMIPHLAYLDLSFNQLNESIPTNKLSDNMTTIDLSNNKLNGTIPSYFSGLPRLQKLSIANNSISGTVPSTIWQNRTLNATEQLILYMQHNELTNISGTTDLPANVTLMLEGNPVCSNNNSLVQFCGPESDNDKDGGSSVVCPSQGCPPSYEYTVECICAAPLIVHYRLKSPGFSDFRAYVKEFESFLTDGLTVHTNQLFIERFAWEKGRLRMNLKLFPEYIDNTSSLEFSTGEVIRIRDMFREWDIHDSDLFGPYELMDFILLDPYREAITPSSSSGISKGALAGIILGAIACAVTLSGIVSILILRIRLRDYRALSKRRNVSRISIKVEGVRSFDYKEMALATNNFSQSAQIGEGGYGKVYKGRLPDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLRDHLSAYSKDVLSFSLRLKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSRYTAKVADFGLSRLAPVPDIEGNVPGHVSTVVKGTPGYLDPEYFLTRNLTDKSDVYSLGVVFLELLTGRPPIFHGENIIRQVNMAYQSGGISLVVDKRIESYPSEYAERFLTLALKCCKDSPDERPKMAEVARELEYICSMLPESDTKGAEYVTSDSSGILFSSQPSSSTIKTPFISGDVSGSDLISGTVPTIKPR* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01830 944 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Lapu8g01830 944 FunFam Leucine-rich repeat protein kinase family protein 578 689 - -
Lapu8g01830 944 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Lapu8g01830 944 Gene3D Ribonuclease Inhibitor 191 292 IPR032675 -
Lapu8g01830 944 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 291 417 - -
Lapu8g01830 944 SUPERFAMILY Protein kinase-like (PK-like) 599 899 IPR011009 -
Lapu8g01830 944 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lapu8g01830 944 Gene3D Phosphorylase Kinase; domain 1 585 689 - -
Lapu8g01830 944 Gene3D Ribonuclease Inhibitor 293 382 IPR032675 -
Lapu8g01830 944 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 31 192 - -
Lapu8g01830 944 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 690 899 - -
Lapu8g01830 944 SUPERFAMILY L domain-like 45 386 - -
Lapu8g01830 944 Pfam Leucine rich repeat 295 342 IPR001611 GO:0005515
Lapu8g01830 944 Gene3D Transferase(Phosphotransferase) domain 1 690 903 - -
Lapu8g01830 944 CDD STKc_IRAK 620 884 - -
Lapu8g01830 944 PANTHER RECEPTOR-LIKE PROTEIN 55 40 888 - -
Lapu8g01830 944 SMART serkin_6 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01830 944 Pfam Protein kinase domain 615 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01830 944 ProSiteProfiles Protein kinase domain profile. 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01830 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01830 Lapu-Chr8 35518715 35532702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01830 18 896 Receptor kinase-like Gene Family AT5G01950 56.551 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lapu8g01830 Pkinase 8.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01830 - - gmx:100801035 1498.8