Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01828 ATGATTCAGCTCGATCGTAACAGCAAGTTTGAACCATTTTCCACTATTACAGAACTTCCAGGCATGAAGTACTATTCTTCCAATGATTTCGTTATGTTCAAATCTACAGAAGCATCTTACAACAAGCTTCTAGAGGCATTGAAGAATAAAAATGTTTCCATGATTGGATTAGTTGGATTAGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTGAGTAAAAAAGTTGAAGAGATGAAACTCTTTGACAAGGTTGTCATGGCAACTGTGTCTCAACCTCCAAATATCACAAATATTCATTTACAAATTGCTGATCAATTGTGCTTTGAGTTAAAGGAAGGATCAGAGATAGGTAGAGCACAGAGGCTATCAGAGAGATTAAGGAAATGTACAATTCTTCTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGCTTTAGGTATTCCATTTGATGAAAGTGGTAAGACTTTTTTCGTGCTCATAACAACTCGGAGTAGAGAAGTATGCAATTCTATGCAATGCCAAAGTATAATTGAAGTTAATCTTTTAACAGAGAAGGAAGCTTGGACTTTGTTCACATATCATGCAAACATAACTGATGACTCTTCAGAAACTTTGAAAGGTGTGGCAAGAAAAATTGTTAACGAATGTAAGGGATTGCCCATTGCAATTGTGACGGTGGGAAGCACGCTAAAGGGAAAGACTATTGAAGAGTTTGAGTTGGCATTGTCAAGACTAGAAAATTCTAAGCCACTAGATGTTCCAAAAGGCTTAATAAGTCCTAATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCAATTAGCTCAATCCTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTGTGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGAGGATTGGGCACAATTGGGACGTTTGGAACAATGGAGAATGCAAGGAGGGAGATGAATGTAGCCATTAGCATCCTCAAGAATTGTTTTTTATTGATGAATGTGAAAATAAAAGAAAGGGTAAAAATGCATGATTTGGTTCGTGATGTAGCCTTGTGGATTGTGTCTAAAAGTGGTCAAGCAATTTTCACACGTACTGAAGTGGATCCAAAAGTGTTGGCAGATGATGAAATCATCAAAGATACGAAAGCAATAGCCTTATGGGATTTGAAAAAACATCATCTTCTCGATTATAAAATAAACTGTCCAACACTTGAAATGCTCTTGCTCTGTTCTACAGGCGGTGGCATAGAAGTATCAGATGTGTGTCTTCAGAGCTTGGAAATGCTTAAAATCTTGGCAATCATAAATTTAGAGAGGTGGGATACAACTGTTTGCCCTTTGCCGGAGTCATTGAAGGCATTAAGAAATCTTCGAACACTGTGCTTGAGAGGTCATGATTTAGGTGACATAACTTTTTTGGAAAAACTGCATGCACTTGAGATTCTTGACTTGCGTGGCTCTTCTTTTGAAGAATTGCCTGTTGGGATTGTAGAATTAAAGAAGTTGAAGCTTCTGGATTTGTTGGAATGTCTGATTAAGAAACATAATGAAGTTGAAGCTTACAAAGTTGTGGGGAAATGTTTGCAGTTAGAGGAATTGTATTTGCATTTTCTCCAATCTAGAAAGGACTTTCCATATGATGTCTCTTTCTCTAGGTTACAAAGGTATGTTATAATAAAAAGATATTCTGATTATTATAGTGACTTTCTGAATAAATACGCACAGTCTAGAAGTTTATTAATAGATGTGTTTGATGTTGCTGCTCAAAATTTTGTATCATTACCAATAAAGGATCTCTTTATAAGAGCAGAGTACCTTTGTTTGGAGATCCTTAAGGGAGGTTATAAAAATATAATCCCATCTATGGATCCACAAGGCATGAATAAGTTGATTGCCCTAGAACTCAGATATTGTCAAGAGATAGAATGTCTCATTGATAGCACCATCAATGCCAGCACTAGTGTTGGTTTGCTTCAAACAGAAGTTATATTCTCCACCCTTGTTTACTTAAGCGCATTGAAGCACATAATCGAAGAAGTGGAAGAAGAGAATGAAGTTCTCTCAAGCACTCAAAGTCATTCTTCTTTAACGTTTCCAAAATTAAGGATTCTTGAAATTAAAGCATGCGACAATTTGGAATATATATTCTCATTGTTTTTAGCTCAAGGGCTAGTGTGTTTGAAAAGAGTGATAATTTCTGGCAACTTGAAGTTGAAGCATGTATTTAGCAGTGGAAAGGAACATAATCTTGCACTGTACCAGAGTTTCCAGGAGACTAATACGGGAAGAAATTTGTCTAATTTGGATACTCTCTGGCTATGGAATTTGCCAAATGTAATTGACATTTGGCCTGAATATTATTGTCCACATCTCCCGAATCTTGAAGAGTTACGTTGCATTGATTGTCCAAAATTGCCTGATTCTTCCGTGCGTAAGGTGGTGACAGCTTCAAATCTTAACCAACACACTACTGCAATGGAGAACGAAGTACTATGGGTGAATACCAACACATTCAACCAATTGGACCATCTATTGTTTCAACCACAAGATCAAGTTGTCCTCAAATTTACACGGCTTTGGTTGACTCATCTTAGAGTAAAAGGTGTCTTTCAATTCGAAATGGGAGAACAGAGGGAGAGTAGAGAAGTGGTTCCCCTAAACATGGATATATCTTTTCTAAGATTGGAGGATCTACCTGAGCTTAACTTCATATGGAAGGGCCCTGCAGGTTTTCTAAGCCTCCAAAAGCTTGACTATATTCTGTTGGATGGATGTCCAAAATTGAAAACCATCTTCTCCACCACTATTGTTGGAAGTTTACCAATGCTGACCACTCTGTATATATATAACTGTGATGAATTGGAACAAATCTTTGATTTAGGTGATGCACAACAACTCAAAACCCTGTGTTCTTCCCGACAAGTCCGCTTCCCAACACTCTCAGCTATTGAGGTTAAAAACTGCAATAAGTTGAAATGTCTTTTTTATAATCTCTCGGCTACTCATTTTACCCGTCTGACAAGTTTGGAAATAAAAGAGTGCTCTCAGTTACATAAGGCTTTTGCTTTTGAACATGAAGCTGATGATGACAGTGAAGAAGGGACGGGTAAGGATGAAGAACAACTACTCTTTCAAAACTTGATATATATAACACTCAAACATTTGTCAAACTTCGAAGAGATTCACCTCGGATTTAAGCTAAAAGATGATGTTCAACAAACCATAGAGGAATGTCCTAAGTATTCTCCAAGTTTAGTTTATATCTACATCCAGGGACAGTTCCTTTTAGCCACAAATGGTGATGGATGA 3324 0.3682 MIQLDRNSKFEPFSTITELPGMKYYSSNDFVMFKSTEASYNKLLEALKNKNVSMIGLVGLGGSGKTTLAKEVSKKVEEMKLFDKVVMATVSQPPNITNIHLQIADQLCFELKEGSEIGRAQRLSERLRKCTILLILDDVWEKLNFEALGIPFDESGKTFFVLITTRSREVCNSMQCQSIIEVNLLTEKEAWTLFTYHANITDDSSETLKGVARKIVNECKGLPIAIVTVGSTLKGKTIEEFELALSRLENSKPLDVPKGLISPNVCLELSYNNLTNQLAQSLLLLCSMFPEDCEIDLEDLFRFGRGLGTIGTFGTMENARREMNVAISILKNCFLLMNVKIKERVKMHDLVRDVALWIVSKSGQAIFTRTEVDPKVLADDEIIKDTKAIALWDLKKHHLLDYKINCPTLEMLLLCSTGGGIEVSDVCLQSLEMLKILAIINLERWDTTVCPLPESLKALRNLRTLCLRGHDLGDITFLEKLHALEILDLRGSSFEELPVGIVELKKLKLLDLLECLIKKHNEVEAYKVVGKCLQLEELYLHFLQSRKDFPYDVSFSRLQRYVIIKRYSDYYSDFLNKYAQSRSLLIDVFDVAAQNFVSLPIKDLFIRAEYLCLEILKGGYKNIIPSMDPQGMNKLIALELRYCQEIECLIDSTINASTSVGLLQTEVIFSTLVYLSALKHIIEEVEEENEVLSSTQSHSSLTFPKLRILEIKACDNLEYIFSLFLAQGLVCLKRVIISGNLKLKHVFSSGKEHNLALYQSFQETNTGRNLSNLDTLWLWNLPNVIDIWPEYYCPHLPNLEELRCIDCPKLPDSSVRKVVTASNLNQHTTAMENEVLWVNTNTFNQLDHLLFQPQDQVVLKFTRLWLTHLRVKGVFQFEMGEQRESREVVPLNMDISFLRLEDLPELNFIWKGPAGFLSLQKLDYILLDGCPKLKTIFSTTIVGSLPMLTTLYIYNCDELEQIFDLGDAQQLKTLCSSRQVRFPTLSAIEVKNCNKLKCLFYNLSATHFTRLTSLEIKECSQLHKAFAFEHEADDDSEEGTGKDEEQLLFQNLIYITLKHLSNFEEIHLGFKLKDDVQQTIEECPKYSPSLVYIYIQGQFLLATNGDG* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01828 1107 SUPERFAMILY L domain-like 346 829 - -
Lapu8g01828 1107 Gene3D - 23 182 IPR027417 -
Lapu8g01828 1107 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 875 998 - -
Lapu8g01828 1107 SUPERFAMILY RNI-like 902 1096 - -
Lapu8g01828 1107 Gene3D - 184 274 IPR042197 -
Lapu8g01828 1107 Pfam NB-ARC domain 37 252 IPR002182 GO:0043531
Lapu8g01828 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 283 IPR027417 -
Lapu8g01828 1107 Coils Coil 675 695 - -
Lapu8g01828 1107 FunFam Probable disease resistance protein At1g61300 23 178 - -
Lapu8g01828 1107 Gene3D Ribonuclease Inhibitor 369 566 IPR032675 -
Lapu8g01828 1107 Gene3D Ribonuclease Inhibitor 610 835 IPR032675 -
Lapu8g01828 1107 Gene3D Ribonuclease Inhibitor 843 1032 IPR032675 -
Lapu8g01828 1107 PRINTS Disease resistance protein signature 219 233 - -
Lapu8g01828 1107 PRINTS Disease resistance protein signature 502 518 - -
Lapu8g01828 1107 PRINTS Disease resistance protein signature 126 140 - -
Lapu8g01828 1107 PRINTS Disease resistance protein signature 54 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01828 Lapu-Chr8 35497449 35502253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01828 40 372 WRKY Transcription Factor Family AT5G45050 26.901 1.96e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01828 - - pvu:PHAVU_008G245200g 1201.42