Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01827 ATGTATCTTTCAAAGGGATGTAAGTGTGAAGAGGTTGTTCTGCTGAGCTTGTCTTTCTACTGCTATTTCCTATTTGCTACTGGGTTGATCACTGATCCCACTGAAGTTGACGCATTAAGAATCATAAAGGGAAGTTTGATTGATATAAATGGAAATTTGAGCAACTGGGATGGTGGAGATCCATGTACATCTAACTGGACAGGAGTTATGTGCTCCGATACAACATTAGTGGATGGCTATCTACATGTTAAACAACTGCATTTACTGAACATGAACTTGTCTGGAACTTTGGCACCAGAGATTGGCCGCTTATCTTATCTGGAAGCGTTGGACTTTATGTGGAATGACATAACTGGGAGTATACCGAAGGAAATTGGCTTTATCAATCCTTTGAAACGCTTACTCCTGAATGGAAATCAATTAACAGGTGAGTTACCAGAAGAACTTGGCTTTCTTCCAGCACTGATTCGATTGCAAATAGATCAGAACAATATCACAGGACCTATACCTTTGTCATTTGCAAAACTGAACACCACTGTACACTTTCACATGAACAACAATTCACTTAGTGGGCAAATACCACCACAACTTTCCAGCTTAGGAAGCCTTCTTCACCTTCTTCTTGACAACAACAATTTTACAGGAGATCTTCCCTCTGAGCTCTCTGAGATGCCAAGCTTAAGGATTCTTCAACTTGATAACAACAACTTTGGTAGAAATAGCATTCCAGATTCTTATGCAAACATGTCAAAATTGATAAAACTGAGTCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTGAGCACGATACCAAGCCTTACTTATCTTGACCTCAGCTTCAATCAGTTGAATGAATCAATTCCAACTAATAAGCTTTCAGACAATATCACAACCATTGATTTATCAAACAATAATCTTATTGGAACTATTCCATCCTACTTTTCTGGTCTTCCACGTCTTCAAAAGCTGTCAATTGCAAACAATTCATTGAACGGAAGTGTTTCTTCTACCATTTGGCAGGACAGGATTTTAAATGGATCACAAATGCTTCACTTGGACATGCAAAATAATCAATTTACAAGCATATCAGGCAGTACAAATCTTCCTCCAAATGTCACCCTCCGGCTTGAGGGAAATCCTATGTGCTCAAATAATAACACCTTAGTTCAGTTCTGTGGATCTGAAAGTGACAGTAGCACCGATGGTAACTTCAATGTTAGCTGTCCCACCCAAGCATGCCCCCCTCCCTATGAATACACTGTGGACTGTTTCTGTGCTGCCCCGTTGGTTGTTAATTATCGATTAAAAAGTCCAGGGTTTTCAGATTTCCGCACGTACATGAATGCATTTCAGAGCATGCTGTCAAGGGGTCTTATAATACATATTAATCAGCTCTATATTAATAAATTTGAATGGGAAGAAGGTCCTCGGTTGGGAATGAACTTGAAGCTTTTTCCTGTGTATGTTGATAATAACAGCTCTCATGTTTTCAATACAAGTGAGGTTCTTCGGCTTAGAAACCGGTTCTTAGACTTTGATCTTCCAACCAATGACTTGTTCGGACCTTTCGAGCTTCTAGATTTCATTCTCCTGGATCCTTACAGAAATGTGATTGTTACCTCTCCGAGTTCAGGGATCAGCAAAGGAGCGCTGGCTGGAATAGTCTTAGGTGCAATTGCCTTTGTGGTTACTTTTTCTGCAATTGTTACCATTCTCATATTGAGGATACGTTTGAGAGATTTTCGTACACCTTCCAAACGGACAAAAGCATCCAGGATCTCAATAAAAATTGAAGGTATAAGATCCTTTTGTTATGAAGAAATGGCAGGTGCTACAAACAATTTTAGTGACTCTGCTCAAATTGGACAAGGGGGGTATGGGAGGGTTTTTAAAGGTCTTCTTCCTGATGGCACAGTTGTTGCCATAAAACGTGCACAGGAGGGTTCCCTGCAAGGTGAGAAGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATACATGCCAAATGGAACGCTAAAGGATCACCTTTCTGTTTATTCAGAAAAACCTCTTACTTTTTCCATGAGGTTGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTGTGTATCTACACTCGGAAGTAGATCCTCCAATATTCCACCGAGATGTCAAGACCACCAATATATTATTGGACTCCAAGTTCACTGCAAAAGTTGCTGACTTTGGACTTTCACGACTTGCCCCAGTTCAAGATACACAAGGAAACGTGCCTAGTCATGTATCTACTGCGGTAAAGGGGACCCCGGGTTACATTGATCCAGAGTACTTCTTAACTCACAAATTTACTGACAAGAGTGATGTTTATAGTCTTGGAGTTGTATTTCTAGAACTTGTAACTGGGAGGCCACCAATCTTCCATGGCGAAAATATTATTAGACAGGTTAGTTTGGCATATGAATCTGGTGGATTGTTTTCAGTTATTGATAAACGTATTGGCTCTTATCCTTCAGAATACGTTGAGAAGTTTTTGACGTTGGCATTAAAGTGTTGCAAAGATGCACCAGGTGAGCGACCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAAAACATCTGTTCAATGTTACCCGAGACCCACGCTGAGGAAGCAGAATATGGGACTAGTGGTTCCGGAAGAATATTCAGTTCACAACCTTCATCATCTACTACCAGGACTCCTTTTGTTTCAGAAGATGTGTCAGGTAGTGACCTTGTCAGTGGAAAGATACCCACCATTAGGCCTAGATAA 2841 0.4058 MYLSKGCKCEEVVLLSLSFYCYFLFATGLITDPTEVDALRIIKGSLIDINGNLSNWDGGDPCTSNWTGVMCSDTTLVDGYLHVKQLHLLNMNLSGTLAPEIGRLSYLEALDFMWNDITGSIPKEIGFINPLKRLLLNGNQLTGELPEELGFLPALIRLQIDQNNITGPIPLSFAKLNTTVHFHMNNNSLSGQIPPQLSSLGSLLHLLLDNNNFTGDLPSELSEMPSLRILQLDNNNFGRNSIPDSYANMSKLIKLSLRNCNLQGPIPDLSTIPSLTYLDLSFNQLNESIPTNKLSDNITTIDLSNNNLIGTIPSYFSGLPRLQKLSIANNSLNGSVSSTIWQDRILNGSQMLHLDMQNNQFTSISGSTNLPPNVTLRLEGNPMCSNNNTLVQFCGSESDSSTDGNFNVSCPTQACPPPYEYTVDCFCAAPLVVNYRLKSPGFSDFRTYMNAFQSMLSRGLIIHINQLYINKFEWEEGPRLGMNLKLFPVYVDNNSSHVFNTSEVLRLRNRFLDFDLPTNDLFGPFELLDFILLDPYRNVIVTSPSSGISKGALAGIVLGAIAFVVTFSAIVTILILRIRLRDFRTPSKRTKASRISIKIEGIRSFCYEEMAGATNNFSDSAQIGQGGYGRVFKGLLPDGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLKDHLSVYSEKPLTFSMRLKIALGSAKGLVYLHSEVDPPIFHRDVKTTNILLDSKFTAKVADFGLSRLAPVQDTQGNVPSHVSTAVKGTPGYIDPEYFLTHKFTDKSDVYSLGVVFLELVTGRPPIFHGENIIRQVSLAYESGGLFSVIDKRIGSYPSEYVEKFLTLALKCCKDAPGERPKMAEVARELENICSMLPETHAEEAEYGTSGSGRIFSSQPSSSTTRTPFVSEDVSGSDLVSGKIPTIRPR* 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01827 946 SUPERFAMILY Protein kinase-like (PK-like) 602 900 IPR011009 -
Lapu8g01827 946 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Lapu8g01827 946 CDD STKc_IRAK 623 889 - -
Lapu8g01827 946 MobiDBLite consensus disorder prediction 903 946 - -
Lapu8g01827 946 Gene3D Transferase(Phosphotransferase) domain 1 693 905 - -
Lapu8g01827 946 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Lapu8g01827 946 SMART serkin_6 617 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01827 946 FunFam Leucine-rich repeat receptor-like kinase 34 148 - -
Lapu8g01827 946 Gene3D Ribonuclease Inhibitor 297 415 IPR032675 -
Lapu8g01827 946 SUPERFAMILY L domain-like 44 394 - -
Lapu8g01827 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Lapu8g01827 946 Gene3D Phosphorylase Kinase; domain 1 587 692 - -
Lapu8g01827 946 PANTHER RECEPTOR-LIKE PROTEIN 55 47 889 - -
Lapu8g01827 946 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 693 902 - -
Lapu8g01827 946 Pfam Protein kinase domain 618 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01827 946 FunFam Predicted protein 173 394 - -
Lapu8g01827 946 MobiDBLite consensus disorder prediction 907 930 - -
Lapu8g01827 946 Gene3D Ribonuclease Inhibitor 31 296 IPR032675 -
Lapu8g01827 946 FunFam Leucine-rich repeat protein kinase family protein 581 692 - -
Lapu8g01827 946 ProSiteProfiles Protein kinase domain profile. 617 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01827 Lapu-Chr8 35473716 35488870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01827 21 901 Receptor kinase-like Gene Family AT5G01950 54.464 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lapu8g01827 Pkinase 8.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01827 - - gmx:100785752 1566.59