Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01826 ATGATTCAGCTAGATCGTATGTCTGAATCATTTTTCACGATTACTGAATTCCAACTTTCAGGCATGAAGTACTATTCTTCCAATGGTTTCTTTATGTTCCAATCTACAGAAGCATCTTACAACGAACTTCTAGAAGCATTAAAGAATAAAAGTGTTTCCATGATTGGATTAGTTGGATTAGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTGGGTAAAAAAGCTGAAGAGATGAAACTCTTTGAGAAGGTTGTCTTGGCAACAGTGTCTCAACCTCCAAATATCACAAATATCCAATTACAGATTGCTGAAAAATTGAATTTCAAGTTCACGGAAAGATCAGAGATAAGTAGAGCACAGAGACTATCAGAAAGATTAAGGAAAGGTACAACTCTTCTAATCTTGGACGATGTATGGGAAAAGATAAACCTTAAAGCCTTGGGTATTCCATTTGATGAAAGTGGTAAGGCTTGTTGTGTACTCCTAACAACTCGAAGTAAAGAAGTATGCAATTCTATGCAATGTCAAAGTATAATTGAAGTTAATCTTTTAACTGACCCGGAAGCTCGGACTTTGTTCACATATTGTGCTGACAAAATTGATGACTCCTCAAAAACTTTGAAACATGTGATAAGAAGACTTGTCCGTGAATTTGAGGGATTACCTATTACAATTTTGACGATGGGAAGAATGCTAAGAGGACAAAATACTGAAGAGTTTAAGTTAGCATTGCTAAGACTAGAAAATTCCAAACAACTTGATATTTCAAAAGGCTTATCAAGTCATCATATTTGCCTTAAATTAGGTTACGATAATTTGACAAACCAATTAGCGAAATCCTTATTATTGTTGTGTTCTATATTTCCAAAAAATTATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGAGGAATGGGCATAATTTGGACATTTGGAACAATGAAAAAAGAAAGGAGGGTCATGCATGCAGCGGTTAACATCCTCAAGAATTCTTATTTGTTGATGGATGTCAAAGAAAAAGAAAAGGTGAAAATGCATGACTTGATTCGTGATCTAGCCTTGTGGATTGCAGATGAAAGTGGTCAAGCAATGTTCACATGTACTGAAGTGCATCCACGAGTGTTGGTAGATGATGAAATCATAAAAGATAAGAAAACAGTAGCCTTGTGGGATATGAAAAGGGGTCTACTTCTCGACGATGAACTGAATTGTCCATCACTTGAAAATCTCTTGCTTCATTCTCCAGAGGTTAACTTTACAATATCAAATGCTTGTCTTGTAAGGTTGAAAATGCTTAAACTACTGGCATGCTTAACATTAGAATATAGGTGGAAGTTGCCTTGTTTGGAGACAAAAAGTCCATCATGGTACAGTTTATTTCTACCAAAATCAATTAGGTCATTGAAAAATCTCAATACTCTTAGCTTGAGAGGTTATAAATTAGGTGACATCTCAATGTTGGAAAGTCTAGAAGCACTTGAGATTCTTGACTTGCGTGGTTCTTCTTTTGAAGAATTGCCTAATGGAATAGTAGCATTAAAGAAATTGAAACTTCTAGATTTGTACAGCTGTTGGATTGAGAAAAATAATGCTTATGAAGTTATAGGAAAATGTTTGCAGCTAGAGGAATTGTATTTGCATTTGTTTCCATCTGAAAAGAAGTTTCCACATGATGTCTCTTTCTCGAGATTGCAGAGGTATGTTATAATACAATATCGCTCTGAATCATGTCCGTATTACATGCACACTGACATTTTGGAAAAGCATAGACCATCTAGAGCTCTATGCATAGATGGTTTTAATGCCTCTGCTCAAACTTTCATATCATTACCAATTAAGGATCTCTTTCTGGGGGCAGTGTACCTTCATTTGAAGTACATTGAGGGAGGTTACAAAAATGTAATCCCGTCCATGCGTTCACAAGGCATGAATCAGATTATTGCCCTGATCCTTGAATATTGTCTAGATATTGAATTCCTCTTTGATAGTACTATCATTACAAACAACAATGTTGATATGCTTCATACCAAGGCTGTATTTTCCAACCTAGGTACCTTAAGGTTGTATCACATGCATGGCCTTCAAGAACTGTTTCATGACCCCTCTTCGCAATGCTGTTTAGAAAAATTAGAAGAGCTAATCATAGATAATTGTAAACAGTTATACAACATATCCTTCCCAAGGAACTCAAAGCTTTGCAGTCTTAAGGAGTTAAGAATAATAAGTTGCCCAATGCTAACTTCTCTCTTCATGTCATTCATTGTCCAAACTCTAAAGCTGCTGGAGGTTCTGCAAATACATGAATGCAGTGAATTGATGCACATAGCAGTGGAAGAAAGGAATGACGATTATGTTGGAAGTCATACCTCTGTAATGCTCCCACAATTACGGATTCTTGATATTGAAGGATGCGACAAGTTGAAATATATATTCCCTGTGTGTTTTGGAGGGTTACCGTGTTTGGAAAGGCTGATCACTAAAAATTGTCACAAGTTGAAGTATGTATTTGGCACTGAAAAGGAACACCATCTTTCAATAATGTACCAGCAGTATCCAGATTTTCTTAGACTGGAAGCTCTCATGTTGGTTTCCTTACCTAACCTGGTTGACATTTGGCCTGCTTATTATCGTCCACGTTTACCAAATTTGAAAGAGTTACAATGCACTGAGTGTCCAACATTGTCTAACTCTTCTTTGTGGAAGATGGCGATTGATTCAGGTCTACGCCACCAAGACACAACTGCAATGAAGAAAATACTAGATGAAGTTGCCCTCAAATTTACAAGCCTTAATTTTTCTCATCTTGGAGTAAAATGCCTTTTTCAATTCCAAGTTGGAGAACCTGGGACCAATATAGAACTACCCTTGAAGTTATCTACTCTAGTATTGCTGGATCTACCACAGCTCAAATTCATATGGAGAAGCCCTACAAATTTTCTAAGCCTCAAACTGCTTCAATCTTTCTATTTGGATAGATGTCCAAAATTGAAAACCATATTCTCCCCTACAATTATTAGAAGCTTACCAGTGCTGAGACAACTAGAAATACTTAATTGTGAGGAATTGGAGCAAATATTTGATTCGGGTGATGCACAAGAACTCAAAAGTCTATTTACTTGTTCCCAACAAGTGTGCTTCCCTAAATTACAGCAGATTAAAGTTCAAAAGTGCAACTTGTTGAAATTCCTTTTTCATAATTTTGAGGCTGGCCATTTTCCCAGTCTATTAATATTGAAAATACAAGAATGCTCTCAAATAAAGAAGGCTTTTTCTTTTGAATGTGAAGCTGACGATGATGGTAAAGTGGGGACTGACAAAGATAGAGAACAAGTTCTGCTACCAAACCTGAGAAATATAACACTCGTAACTTTGCCAAACTTCAATGAGATTCACCATGGATATGAGTTAAAAGATCATGTTGAACACATCGTAGAGGATTGTCCGGAATATTCTCCAATTATAGGCTTTGGAACTACTCCTCTTACACCAGATATATTAGGCATCAATTAA 3516 0.3623 MIQLDRMSESFFTITEFQLSGMKYYSSNGFFMFQSTEASYNELLEALKNKSVSMIGLVGLGGSGKTTLAKEVGKKAEEMKLFEKVVLATVSQPPNITNIQLQIAEKLNFKFTERSEISRAQRLSERLRKGTTLLILDDVWEKINLKALGIPFDESGKACCVLLTTRSKEVCNSMQCQSIIEVNLLTDPEARTLFTYCADKIDDSSKTLKHVIRRLVREFEGLPITILTMGRMLRGQNTEEFKLALLRLENSKQLDISKGLSSHHICLKLGYDNLTNQLAKSLLLLCSIFPKNYEIDLEDLFRFGRGMGIIWTFGTMKKERRVMHAAVNILKNSYLLMDVKEKEKVKMHDLIRDLALWIADESGQAMFTCTEVHPRVLVDDEIIKDKKTVALWDMKRGLLLDDELNCPSLENLLLHSPEVNFTISNACLVRLKMLKLLACLTLEYRWKLPCLETKSPSWYSLFLPKSIRSLKNLNTLSLRGYKLGDISMLESLEALEILDLRGSSFEELPNGIVALKKLKLLDLYSCWIEKNNAYEVIGKCLQLEELYLHLFPSEKKFPHDVSFSRLQRYVIIQYRSESCPYYMHTDILEKHRPSRALCIDGFNASAQTFISLPIKDLFLGAVYLHLKYIEGGYKNVIPSMRSQGMNQIIALILEYCLDIEFLFDSTIITNNNVDMLHTKAVFSNLGTLRLYHMHGLQELFHDPSSQCCLEKLEELIIDNCKQLYNISFPRNSKLCSLKELRIISCPMLTSLFMSFIVQTLKLLEVLQIHECSELMHIAVEERNDDYVGSHTSVMLPQLRILDIEGCDKLKYIFPVCFGGLPCLERLITKNCHKLKYVFGTEKEHHLSIMYQQYPDFLRLEALMLVSLPNLVDIWPAYYRPRLPNLKELQCTECPTLSNSSLWKMAIDSGLRHQDTTAMKKILDEVALKFTSLNFSHLGVKCLFQFQVGEPGTNIELPLKLSTLVLLDLPQLKFIWRSPTNFLSLKLLQSFYLDRCPKLKTIFSPTIIRSLPVLRQLEILNCEELEQIFDSGDAQELKSLFTCSQQVCFPKLQQIKVQKCNLLKFLFHNFEAGHFPSLLILKIQECSQIKKAFSFECEADDDGKVGTDKDREQVLLPNLRNITLVTLPNFNEIHHGYELKDHVEHIVEDCPEYSPIIGFGTTPLTPDILGIN* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01826 1171 Gene3D - 184 270 IPR042197 -
Lapu8g01826 1171 Gene3D Ribonuclease Inhibitor 786 1123 IPR032675 -
Lapu8g01826 1171 SUPERFAMILY RNI-like 955 1090 - -
Lapu8g01826 1171 Gene3D - 271 356 IPR036388 -
Lapu8g01826 1171 FunFam Probable disease resistance protein At1g61300 31 178 - -
Lapu8g01826 1171 Gene3D Ribonuclease Inhibitor 625 784 IPR032675 -
Lapu8g01826 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 285 IPR027417 -
Lapu8g01826 1171 SUPERFAMILY L domain-like 346 904 - -
Lapu8g01826 1171 PRINTS Disease resistance protein signature 793 809 - -
Lapu8g01826 1171 PRINTS Disease resistance protein signature 219 233 - -
Lapu8g01826 1171 PRINTS Disease resistance protein signature 54 69 - -
Lapu8g01826 1171 PRINTS Disease resistance protein signature 126 140 - -
Lapu8g01826 1171 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 943 1090 - -
Lapu8g01826 1171 Pfam NB-ARC domain 38 252 IPR002182 GO:0043531
Lapu8g01826 1171 Gene3D - 24 182 IPR027417 -
Lapu8g01826 1171 Gene3D Ribonuclease Inhibitor 455 567 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01826 Lapu-Chr8 35459897 35464154 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01826 40 358 WRKY Transcription Factor Family AT5G45050 24.085 5.80e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01826 - - gmx:102662074 1316.6