Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01821 ATGCTTGCTGCTGCTGCTTCAGCTTCTCGGCACCTTATTCAACGCGATGCCAGCATCGGTGCTTTCAGTGGCAGTGGCAATAGAGTTCGCTCTCTTTTAACTGTTTCTGCGATCGCCACAACATACCCAATTCGCGCTAAAACATGTTACAGTCATAGTTGTGGAATCAGTTTCAATGCTCCAAAACACAGAATGTGCCCAAGTTTGCTTTTTGCTGTAAAGGGGTTCCTCTCTGATTCATCAAATTCTAATTCTCCACATGGCAGAGTTCCCAGACCTTACTTACCAGTTCCTAGTTCGACTGTGGACGGGCGAGCATTTTTCTCAACTTCAAGTAAAGATGATGGAGGCCAAAACAAAAAGGCTGCTTCTTCCACCAATGCTAAACCACCTCCATCACTTCCTGATGGGCAAGTTGCTGATGTGAAGATCCTTCGCACCCTTGCCAGTTACCTTTGGATGAAAGATAATCTTGAATTTCGGGTTCGGGTTATTGCTGCATTGGGCTTACTTGTTGGGGCTAAGGTTTTGAATGTTCAGGTCCCATTCTTGTTCAAGCTTGCAGTTGATTCGTTGACGTCTGCCTCGGGGAGTGCTGCTGCTCTTGCTTCGAATTCAAGTGGGCTGGCTCTTTTTGCAACTCCAGTGGCGGTGTTGGTCGGATATGGTATTGCGCGATCAGGAGCTTCTGCTTTCAATGAACTGCGGACTGCTATATTTTCTAAGGTTGCACTGCGAACAATTCGATTGGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTTCGGTATCATCTAAGCCGAGAAACTGGTGCATTAAGCAGAATAATTGATCGTGGTAGTCGTGCAATAAATTTCATTCTGTCCTCTATGGTGTTCAATGTAGTACCTACCATGTTAGAGATATCTATGGTAGCAGGTATACTGGCCTACAAATTTGGAGCTCCCTTTGCATTGATTACTTCCTTATCGGTTGCTGCTTATGTTATTTTCACACTGTCTATCACACAGTGGAGGACTAAGTTCAGGAAAGCCATGAACAGGGCGGATAATAATGCTAGTACGAGGGTTATTGATTCACTTATTAATTATGAGACTGTCAAATATTTTAATAATGAAGTTTATGAAGCTGATAATTATGACAAGTACCTAAAGAAGTATGAAGATGCTGCTCTGAAAACCCAACGAAGCCTTGCTTTGTTGAACCTTGGTCAAAATATTATATTTAGTACTGCTCTTTCATCAGCAATGGTGCTGTGCTCTCATGGGATCATGGATGGGACGATGACTGTTGGTGATTTGGTAATGGTGAATGGGCTTCTCTTCCAACTATCTCTTCCACTTAATTTCCTTGGTAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAATCCATGTTTCAGTTACTTGAGGAAAGAGCAGACATTAGGGATAAAGAAAATGCAAAGCCTCTTAGATTTAATGGGGGGAGTATCCAATTTGAGAATGTACATTTTAGTTACCTCCCAGAAAGAAAGATACTAGATGGCATATCGCTTGTTGTGCCAGCTGGTAAAAGTGTGGCAATTGTTGGAACTAGTGGAAGCGGAAAATCAACCATTCTTAGATTGCTATTCAGGTTCTTTGATCCTAATTCTGGAAGTATAACGATAGATAATCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGAAAGTCCATTGGTGTTGTTCCACAAGATACTGTACTTTTTAATGATACAATATTTCACAACATTCACTATGGCAGGCTTTCTGCAACAAAAGAGGAGGTCTATGAAGCTGCTCAGCAAGCAGCAATTCATAACACTATCATGAATTTTCCCGATAAATATTCAACTGTTGTTGGAGAGCGAGGGCTCAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCCTTGGCTCGTTCATTCTTAAAAGCACCTGCAATTCTGTTGTGTGATGAAGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTCTAAGTGCGTTAAAGTCAGTAGCCAAAAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGATGAGATTATTGTTCTGGAAAATGGGAAGGTGATTGAGCAAGGACCACATGAAGTACTCTTATCAAAAGCAGGAAGATATGCACAACTGTGGGGACAACAAAATAACTCAGTTGATGCAATTGATACAGCCGTCAATCTAGGAGCATAA 2241 0.4203 MLAAAASASRHLIQRDASIGAFSGSGNRVRSLLTVSAIATTYPIRAKTCYSHSCGISFNAPKHRMCPSLLFAVKGFLSDSSNSNSPHGRVPRPYLPVPSSTVDGRAFFSTSSKDDGGQNKKAASSTNAKPPPSLPDGQVADVKILRTLASYLWMKDNLEFRVRVIAALGLLVGAKVLNVQVPFLFKLAVDSLTSASGSAAALASNSSGLALFATPVAVLVGYGIARSGASAFNELRTAIFSKVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRAINFILSSMVFNVVPTMLEISMVAGILAYKFGAPFALITSLSVAAYVIFTLSITQWRTKFRKAMNRADNNASTRVIDSLINYETVKYFNNEVYEADNYDKYLKKYEDAALKTQRSLALLNLGQNIIFSTALSSAMVLCSHGIMDGTMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADIRDKENAKPLRFNGGSIQFENVHFSYLPERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPNSGSITIDNQDIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAAQQAAIHNTIMNFPDKYSTVVGERGLKLSGGEKQRVALARSFLKAPAILLCDEATSALDSTTEAEILSALKSVAKNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSKAGRYAQLWGQQNNSVDAIDTAVNLGA* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01821 746 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 165 462 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01821 746 MobiDBLite consensus disorder prediction 108 136 - -
Lapu8g01821 746 FunFam ABC transporter B family member 25 488 742 - -
Lapu8g01821 746 CDD ABCC_ATM1_transporter 496 731 - -
Lapu8g01821 746 CDD ABC_6TM_ATM1_ABCB7 167 470 - -
Lapu8g01821 746 Pfam ABC transporter transmembrane region 165 449 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lapu8g01821 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 730 IPR003439 GO:0005524
Lapu8g01821 746 FunFam ATP-binding cassette sub-family B member 7 136 484 - -
Lapu8g01821 746 MobiDBLite consensus disorder prediction 108 132 - -
Lapu8g01821 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 731 IPR027417 -
Lapu8g01821 746 Gene3D - 488 743 IPR027417 -
Lapu8g01821 746 Gene3D ABC transporter type 1, transmembrane domain 151 486 IPR036640 GO:0005524|GO:0016020
Lapu8g01821 746 Pfam ABC transporter 512 661 IPR003439 GO:0005524
Lapu8g01821 746 SUPERFAMILY ABC transporter transmembrane region 150 475 IPR036640 GO:0005524|GO:0016020
Lapu8g01821 746 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 147 727 IPR039421 -
Lapu8g01821 746 SMART AAA_5 521 707 IPR003593 GO:0016887
Lapu8g01821 746 ProSitePatterns ABC transporters family signature. 633 647 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01821 Lapu-Chr8 35362991 35388140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01821 332 732 Calmodulin-binding Proteins AT2G36910 37.046 2.01e-66 237