Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01796 ATGGAGCAGGAACAACATAACCTTGAAAGCTTCTTAACATGGGCAGCACAACTTGGAATATCAGACTCAACAATACGCACCAACGAACCTCAACATTCTCTTTCCTCATGTTTGGGTTCTTCTTTGTGTGTCGCTCATTTTCCTCACTCTGAATGCTGCAGGAGAGGTTTGGGTGCTGTGAGAGACCTTAGGAGGGGGGAAATTGTTCTCAGAGTTCCAAAATCTGCTTTAATGACAAGAGAGAGTGTTATGGAAGATGAAAAGCTCTGTTTTGCTGTCAATAGACACTCTGGTCTCTCCTCAGCTCAGATATTGGTCGTTTGCTTGTTGTATGAAATGGGTAAAGGGAAGACTTCAAGGTGGCATCCTTACCTCATGCATTTGCCACACACTTATGACATACTAGCCATGTTTGGTGAATTTGAGAAGCGTGCTCTGCAAGTGGATGAGGCGGTGTGGGTCACCGAAAAAGCTATTCTTAAGGCCAAATCAGAGTGGAAAGAAGCTCATGCTTTGATGGAAGATCTCGTGTTCAGGCCCCAGTTTTTAACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCTCGAACTTTGCATGTACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAGAGGAGTCATCTGACATTGAGGATTTAGAACATTTGCTATCAAGCTCTTCCATTCGTGATACAATCTTATTAAATGGAGACAAGAATATAATGGTAGATGCAGAACAGCTTGATTCTCATTCCCAGAGATTAACTGATGGTGGTTTTGAGGAAGGTGTTAACGCATATTGCTTCTATGCCAGGGCACATTACAAGAAAGGAGATCAGGTTCTATTATGCTATGGAACTTACACAAATTTGGAGCTTCTTGAACATTATGGCTTTCTCCTACAAGAAAATCCAAATGACAAGGTTTTTATCCCTTTAGAACCAGCTGTGTATTCTTCCACTTCATGGTCTAAGGAATCACTCTATATCCATCATAACGGGAAGCCTTCATTTGCACTACTTGCTGCATTACGGTTGTGGGCAACCCCTCAAAACAAGAGGAGGTCTGTTGGACATCTTGTGTATTCTGGTTCTCAACTGTCTGCAGACAATGAAATTTTCATCACGAAATGGCTGTCCAAAACTTGTGCTACTGTGTTAAAGAATCTGCCAACATCTATTGATGAGGACACCTTGCTCCTGAATGCAATGGACAATAGCCAAAATTTTTTCACTTTCATGGAGATCACAAAACTTGTGTCTTCCAGGGATGAGATGTATACCTTCTTAGAAGCACATAATATGAAGGACGCACATAGTTCCACTGACATAATTTTATCTAGAAAAGCAAGAAGGTCCATGGACAGGTGGAAATTAGCTGTCCAATGGAGGCTCAAGTATAAGAAAGTCCTTTTTGATTGTATATCTTGTTGCAATGAAATACTAGATTCTTTCATAAAATAA 1500 0.4127 MEQEQHNLESFLTWAAQLGISDSTIRTNEPQHSLSSCLGSSLCVAHFPHSECCRRGLGAVRDLRRGEIVLRVPKSALMTRESVMEDEKLCFAVNRHSGLSSAQILVVCLLYEMGKGKTSRWHPYLMHLPHTYDILAMFGEFEKRALQVDEAVWVTEKAILKAKSEWKEAHALMEDLVFRPQFLTFKAWVWAAATISSRTLHVPWDEAGCLCPVGDLFNYDAPGEESSDIEDLEHLLSSSSIRDTILLNGDKNIMVDAEQLDSHSQRLTDGGFEEGVNAYCFYARAHYKKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKVFIPLEPAVYSSTSWSKESLYIHHNGKPSFALLAALRLWATPQNKRRSVGHLVYSGSQLSADNEIFITKWLSKTCATVLKNLPTSIDEDTLLLNAMDNSQNFFTFMEITKLVSSRDEMYTFLEAHNMKDAHSSTDIILSRKARRSMDRWKLAVQWRLKYKKVLFDCISCCNEILDSFIK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01796 499 FunFam Protein SET DOMAIN GROUP 40 316 432 - -
Lapu8g01796 499 Gene3D - 325 497 IPR036464 -
Lapu8g01796 499 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 433 - -
Lapu8g01796 499 FunFam Protein SET DOMAIN GROUP 40 8 312 - -
Lapu8g01796 499 ProSiteProfiles SET domain profile. 40 298 IPR001214 GO:0005515
Lapu8g01796 499 Pfam Rubisco LSMT substrate-binding 346 483 IPR015353 -
Lapu8g01796 499 SUPERFAMILY SET domain 42 316 IPR046341 -
Lapu8g01796 499 Pfam SET domain 55 298 IPR001214 GO:0005515
Lapu8g01796 499 Gene3D set domain protein methyltransferase, domain 1 4 312 - -
Lapu8g01796 499 CDD SET_LSMT 49 312 - -
Lapu8g01796 499 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 308 488 IPR036464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01796 Lapu-Chr8 35115933 35119882 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu8g01796 SET 5.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01796 - - gmx:100787452 887.871