Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01793 ATGGCACCTGTTTTGCCTCCCGGTTTCAGGTTCCACCCTACTGACGAAGAACTTGTTGCTTATTACCTTAAAAGGAAGATCAATGGCAGACAGATTGAGTTGGAGATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCCTGGGACTTACCAGGGAAGTCACTGTTACCGGGGAAGGATCTGGAGTGGTATTTTTTTAGCCCTCGTGATAGAAAATACCCAAATGGGTCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCAACAGGAAAGGATAGGAAGGTAAATTCGAAGGGTCGGTCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGGAGAGCACCCCATGGCTCTCGCACAAATTGGGTTATGCATGAATATCGTCTTGATGAGACAGAATGCGAAACTGCTTCAGGCTTGCAGGATGCTTATGCTCTCTGCCGTGTGCTCAAAAAGACTACCGTGATTCCTCCAAAAGATGGCCGACACTATGTTAATGCTCCCAATGTCAATCAGATTACAAGCGATCAATCATCAAGCATTGAACTGTACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCAAATTATTTTATGTCTGTGGATACTTGCTCACCCCACAATATTGTTGCAAATGAAACTCCTCTGACGACAAGGGGTCATGAGAAACGGTCACAGTTCTCAGCACAAGATCCATTATTTAGTCTTCCAACTGCATATCCTAATTTTGGATCTATAACATATCCTCCATCCAGGGTGAATATGGCCCAAGAGTGTGCAAGGATACAACATAGGTTTGTTATGCCCCCTTTGGAGGTAGATGACTTCTCTCAAGTTGGAATCTCAGAGCTGAACATGACGCAAGCCTCTAGTTCCATGCAAGGAAGCAGAACTGAAACGGATATTTTACAGGAAATTCTTTCAGTTGCTCATGCATCTCAGGAATTAATAAATCAACCCAGCTACTCACAGGAATGGGGTTCCAATGACTATTATGCTCTTCGTGGAGACGATTTTACCTTCATGGTTGGCACTAATTACAATCATTCAAATGAAATGAGCTCTGTGAGGTATGGTGACAAAGCATGGGAAGATGCAAACACAAGGACAATAGAGATCGGAGATATGGATGAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTCGGAATGTCAAGAGAAGATTTAGAAAAGAGAGAAGAACAGAAGATTGTCCCAATAGAGGATATTTTAAGCTTTCAAACTAACAGGGAAGAAACTGAGGTGCAAGAATCTGAGCAATATAGCAACATGAAACACAACGACAGTGAAACTAATGATTTCTCATTGGGCTTCATGAATGATGGTGACCCTAGCAAGAACTTTATAGAAGATGGTGACGAGGATGATTATTCAAGTTCTCCTAGTTTCGAGGTGGTTGAGGAAATAAAAGTCAATCATGGAAAAAAGCTTGTGTCGACTCGTCAAATGGCCGAGATATTCTTTCACCAAATAGTTCCTTCTCAAACCGTCCAAGTTCAACTCAAGTCAGTGATGGCAAGCAATCATTATGTAGAGAATGCAGAGACAATGTTAATGATAATGGAGAACCAAGGGTCTTTATTAAGGAAGGTTAAGGCCTATGTGAAGGGGAAACTAATAAAGCCATCAAAGACAATAGCAAATGCGATTGTATTCGTCTTTGCACTTGTGTTGATGCATTATGTTCTTTTAAAAGGAAGAAGTGAAGACGTGGAATGA 1758 0.4158 MAPVLPPGFRFHPTDEELVAYYLKRKINGRQIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKGRSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDETECETASGLQDAYALCRVLKKTTVIPPKDGRHYVNAPNVNQITSDQSSSIELYSEGRGEDLDSSNYFMSVDTCSPHNIVANETPLTTRGHEKRSQFSAQDPLFSLPTAYPNFGSITYPPSRVNMAQECARIQHRFVMPPLEVDDFSQVGISELNMTQASSSMQGSRTETDILQEILSVAHASQELINQPSYSQEWGSNDYYALRGDDFTFMVGTNYNHSNEMSSVRYGDKAWEDANTRTIEIGDMDEEFKAERMVENLRWVGMSREDLEKREEQKIVPIEDILSFQTNREETEVQESEQYSNMKHNDSETNDFSLGFMNDGDPSKNFIEDGDEDDYSSSPSFEVVEEIKVNHGKKLVSTRQMAEIFFHQIVPSQTVQVQLKSVMASNHYVENAETMLMIMENQGSLLRKVKAYVKGKLIKPSKTIANAIVFVFALVLMHYVLLKGRSEDVE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01793 585 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Lapu8g01793 585 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 285 - -
Lapu8g01793 585 FunFam Nac domain-containing protein 86 14 158 - -
Lapu8g01793 585 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Lapu8g01793 585 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Lapu8g01793 585 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01793 Lapu-Chr8 35079103 35083021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01793 1 575 NAC Transcription Factor Family AT1G65910 44.539 1.69e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g01793 NAM 3.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01793 - - gmx:100809019 961.829