Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01792 ATGGCACCTGTTTTGCCTCCCGGTTTCAGGTTCCACCCTACTGACGAAGAACTTGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGACAGATTGAGTTGGAGATCATTCCTGAAGTTGATCTCTACAAGTGTGAACCCTGGGACTTACCAGGGAAGTCACTGTTACCGGGGAAGGATCTGGAGTGGTATTTTTTTAGCCCTCGTGATAGAAAATACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGGTATTGGAAGGCAACAGGAAAGGATAGGAAGGTAAATTCGAAGGGTCGGTCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGGAGAGCACCCCATGGCTCTCGCACAAATTGGGTTATGCATGAATATCGTCTTGATGAGACAGAATGCGAAACTGCTTCAGGCTTGCAGATTACAAGCGATCAATCATCAAGCATTGAACTATACTCTGAAGGAAGGGGGGAAGATTTAGATAGTTCCAATTATTTTATGCCAATGGATACTTACTCACCCTACAACGTGGGAACTGAGACTTCTCTAACTATTAATGGCGGGATGACAAGGGATCATGGGAAATGGTCACACTTCTCATCACAAGATCCATTTAGTCTTCAAACTTCTTCATATCCTAATTTTGGAGCCATTGCATACCCTCCATCCAAGGTGGATGTAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTGTTATGCCTCCTTTGGAAGTGGATGACTTCCCTCAAGTTGGAATCTCAGAATTGAAAATGACACAAGCCTCTAGTTCCATGCAAGGAAGCAGAACTGAAACGGATATTTTACAAGAAATTCTTTCAGTTGCTCATGCCTCTCAGGAATTAATAAATCAATCCAGCTACTCACAGGAATGGGGTGGCAATGATTATTATGCTCCTCGTGGAGACGATTTTGCCTTCATGGTTGGCACTAATTACAATCATTCAAATGAAATGAGCTCTGTGAGGTATGTTGACAAAGCATGGGAAGATGCAAACACAAGGACAATAGAGATCGGAGATATGGATGAAGAATTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTCGGAATGTCAAGAGAAGATTTAGAAAAGATGGAAGACCAAAATATTGTCCCAATAGAGGATATTTCAAGCTTCCAAACTAACATGAAAGAAAATGAGGTGCAAGAATCCGAGCAACACAGTAACATGGAACCTAATGACACTGAAACCAATGATTTCTCAATGGGCTTCGTCAATGATGACGACCCAACCGAGAACTTCACAGAAGATGGTAACAGGGATGATGATTATTCAAGTTCTCCTAGTTTTGAGGTTGTTGAGGAAATAAAGGTTAATCGTGGAATGTTTGTTTCGACTCGTCAAGTGGCCGAGACATTCTTTCACCAAATGGTTCCTTCACAAACCGTCCAAGTTCAGCTTAATTCAGTGATGGCACACAATCATTATGTAGAGAATGCAGAAGCAATGCTATTGATAATGGAAAACCAAGGGTCTTTAAGGAAGGTTAAGGCTTATGTGATGGGGAAGCTAATAAAGCCATCAATGACAATAGCAAGAGCGATTGTATTCGTCTTTTCACTTGTGTTGATGCATTATGCTTTTTTAAAGGGAGAAGTGAAACTTTGGAATGAAACATGTTGCAGTAACAGTGCTACCATCATGAAGAGAACGAGTCAATCATCTCAGACAATGAAATGGAATGAGTCAAATGAGGTTTGGTTTGTTGGCATCAAAAGTGAGAAAGGATTAAGTGCAGTCTTGAAGAAAATAAGCATTTTTCTCACTGTATCATTTGCTCTCTTTACCATGTGGGCTAACCACAATTGA 1869 0.4104 MAPVLPPGFRFHPTDEELVAYYLKRKINGRQIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSKGRSVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDETECETASGLQITSDQSSSIELYSEGRGEDLDSSNYFMPMDTYSPYNVGTETSLTINGGMTRDHGKWSHFSSQDPFSLQTSSYPNFGAIAYPPSKVDVALECARMQHRFVMPPLEVDDFPQVGISELKMTQASSSMQGSRTETDILQEILSVAHASQELINQSSYSQEWGGNDYYAPRGDDFAFMVGTNYNHSNEMSSVRYVDKAWEDANTRTIEIGDMDEEFKAERMVENLRWVGMSREDLEKMEDQNIVPIEDISSFQTNMKENEVQESEQHSNMEPNDTETNDFSMGFVNDDDPTENFTEDGNRDDDYSSSPSFEVVEEIKVNRGMFVSTRQVAETFFHQMVPSQTVQVQLNSVMAHNHYVENAEAMLLIMENQGSLRKVKAYVMGKLIKPSMTIARAIVFVFSLVLMHYAFLKGEVKLWNETCCSNSATIMKRTSQSSQTMKWNESNEVWFVGIKSEKGLSAVLKKISIFLTVSFALFTMWANHN* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01792 622 MobiDBLite consensus disorder prediction 399 447 - -
Lapu8g01792 622 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Lapu8g01792 622 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 190 - -
Lapu8g01792 622 SUPERFAMILY NAC domain 3 137 IPR036093 GO:0003677|GO:0006355
Lapu8g01792 622 Gene3D NAC domain 14 156 IPR036093 GO:0003677|GO:0006355
Lapu8g01792 622 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Lapu8g01792 622 FunFam Nac domain-containing protein 86 14 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01792 Lapu-Chr8 35072580 35076334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01792 1 617 NAC Transcription Factor Family AT1G65910 40.862 3.95e-142 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu8g01792 NAM 4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01792 - - gmx:100809019 995.342