Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01768 ATGACGGGGAAGAATGTGAAGGCGGCTGCGACGAGGGAAGAGGGAGAGGATGGGAAGCAAACGACGTCGTCTTCGACTCCACTTTCTCATTCGCAGTCGTCGTCTACGTCGACGTCGTCGTCTACGTCGACGTCGTCGTCTTCCGATGAGAGAGAGTACGAGGTGCAGGACCTGCGGGACCGGTTGAAATCTTCGAGAGGGAGCCGGTTCGATCTTATAGAGAGTGAGTTGGGACTCAACTCAAGATGGAGCAAGTTCAGTCGCCAAGCTCTTCTACATGGAATCCGAGGCTTCTCCAAGGACTTCGTCATTCATCCCGATAACAGGTGGTACCGGGCATGGACAAAATTCATATTGCTATGGGCAGTGTATTCATCCTTCTTCACCCCAATGGAGTTTGGATTTTTCCGTGGCCTGCCTGAGAATCTCTTTATTCTGGACATCATTGGACAAATAGCTTTTCTCGTCGATATTTTCTTGCAATTCTTTGTTGCTTACAGAGACAGCCAGACCTATCGTATGGTCTACAAGCGAACACCTATAGCTCTGCGGTATCTAAAATCTAACTTCATGTTTGATCTTCTTGGGTGTATGCCATGGGACGTCATCTTCAAGGCTTGTGGACGAAGAGAGGAAGTGAGGTACCTTTTGTGGATCAGATTATACCGGGTGCGGAAAGTAACAGATTTTTTCCACAAGCTGGAGAAGGACATACGTATCAACTACATTACTACCCGGATTGTGAAACTGATAGTAGTCGAACTCTACTGCACCCATACAGCAGCCTGCATTTTCTACTTTTTGGCTACTACACTACCGGAATCACAAGAAGGGTACACATGGATAGGAAGTTTAAAATTGGGTGACTATAGTTATTCACATTTCAGAGAAATTGATCTTTGGAAGCGCTACACAACATCTCTGTATTTCGCTATTGTTACTATGGCAACAGTTGGCTATGGAGATATACATGCAGTAAATTTGAGGGAGATGATATTCATAATGATATACGTTTCGTTTGATATGATTCTTGGTGCCTATTTGATTGGTAACATGACAGCTTTGATAGTCAAGGGGTCAAAGACTGAAAAGTTTAGAGACAAGATGACAGACCTTTTGAAATATATGAACAGAAATAGGCTTGGAAGGGATATACGTGAACAAATTAAAGGCCATGTGCGCTTACAGTATGAGAGTAGCTACACTGAGGCCGCTGTTATTCAGGATATCCCTATTTCTATTCGAGCTAAGATATCCCAAACGTTATACTTGTCATACATTGAAAAGGTTTCTCTTTTTAAGGGATGCTCTTCAGAATTCATCAACCAGATTGTTATTAGGATCCATGAGGAGTTCTTTCTTCCAGGGGAAGTTATAATGGAACAAGGAAATGTTGTAGATCAACTATATTTTGTCTGTCATGGAGTGCTGGAGGAAGTAGGCATAGCTGAAGATGGGTCTGAAGAAACTGTTTCACTTCTGCAGCGTCACAGTTCATTTGGAGAAATATCTATTCTTTGCAACATTCCTCAGCCATACACTGTCCGCGTTTGTGAACTTAGTAGACTCCTGCGACTTGATAAACAATCATTTACAAATATCCTAGACATATACTTTTATGATGGAAGAAAAGTATTAAACAACCTTCTAGAGGGAAAAGAGTCTTTTCGAGGTAAACAGTTGGAGTCAGACATCACATTTCATATTGGAAAACAAGAAGCCGAGCTTTCTTTGAAGGTCAATAGTGCAGCTTTTCATGGGGATCTGCATCAGCTCAAAGGTTTAATTCGAGCCGGAGCTGATCCCAACAAGACAGATTATGATGGAAGGTCACCTTTGCATCTTGCAGCATCTAGAGGACATGAAGATATCACTCTTTTCCTTATTCATGAAAGTGTAGATGTCAATATTAAAGATAACTTCGGGAACACGCCCTTACTTGAAGCAGTTAAGAATGGAAATGATCGGGTTGCTTCTTTACTTGTTAAAGAAGGGGCCTCCATGAAGATCGAAAATGCTGGTTGTTTTTTGTGTACAGCAGTTGCAAGGGGAGATTCAGATTATCTTAAAAGACTTTTATCCAATGGCATGGATCCTAACTTAAAAGATTATGATTACCGAAGCCCTCTTCACATAGCCGCAGCTGAAGGTTTATACTTCATGGCAAAGTTGCTATTAGAAGCCGGAGCTAGTGTTTTTACCAAAGACAGATGGGGAAATACCCCGCTTGATGAAGCCCGGATGTGTGGAAATAAGAATCTCATCAAGTTACTGGAAGATGCAAAATCTGCTCAACTGTTAGAATTCCCGTATTCCTCTCAAGAATTTACAGATAAAATGCACCCAAAGAAGTGCACAGTGTTCCCTTTCCACCCGTGGGATCCGAAAGATAATAGAAGACATGGAATTGTACTATGGATTCCACACTCCATCGAAGAGCTAATCAAATCAGCGGCAGAACAAATAGAATTTTCTGGCGATTCTTTTATTTTATCAGAAGATGGTGGTAAAATTACTGATGTGGACATGATTAAGGATGGTCAGAAGCTGTACTTAGTCCATGAAACACATTAA 2574 0.4176 MTGKNVKAAATREEGEDGKQTTSSSTPLSHSQSSSTSTSSSTSTSSSSDEREYEVQDLRDRLKSSRGSRFDLIESELGLNSRWSKFSRQALLHGIRGFSKDFVIHPDNRWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIFLQFFVAYRDSQTYRMVYKRTPIALRYLKSNFMFDLLGCMPWDVIFKACGRREEVRYLLWIRLYRVRKVTDFFHKLEKDIRINYITTRIVKLIVVELYCTHTAACIFYFLATTLPESQEGYTWIGSLKLGDYSYSHFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLLKYMNRNRLGRDIREQIKGHVRLQYESSYTEAAVIQDIPISIRAKISQTLYLSYIEKVSLFKGCSSEFINQIVIRIHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAEDGSEETVSLLQRHSSFGEISILCNIPQPYTVRVCELSRLLRLDKQSFTNILDIYFYDGRKVLNNLLEGKESFRGKQLESDITFHIGKQEAELSLKVNSAAFHGDLHQLKGLIRAGADPNKTDYDGRSPLHLAASRGHEDITLFLIHESVDVNIKDNFGNTPLLEAVKNGNDRVASLLVKEGASMKIENAGCFLCTAVARGDSDYLKRLLSNGMDPNLKDYDYRSPLHIAAAEGLYFMAKLLLEAGASVFTKDRWGNTPLDEARMCGNKNLIKLLEDAKSAQLLEFPYSSQEFTDKMHPKKCTVFPFHPWDPKDNRRHGIVLWIPHSIEELIKSAAEQIEFSGDSFILSEDGGKITDVDMIKDGQKLYLVHETH* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01768 857 FunFam Potassium channel KAT2 420 557 - -
Lapu8g01768 857 PANTHER POTASSIUM CHANNEL AKT1 76 854 IPR045319 GO:0005249|GO:0006813
Lapu8g01768 857 Gene3D - 674 767 IPR036770 -
Lapu8g01768 857 MobiDBLite consensus disorder prediction 1 54 - -
Lapu8g01768 857 PRINTS Ankyrin repeat signature 609 624 IPR002110 GO:0005515
Lapu8g01768 857 PRINTS Ankyrin repeat signature 721 735 IPR002110 GO:0005515
Lapu8g01768 857 ProSiteProfiles cAMP/cGMP binding motif profile. 432 552 IPR000595 -
Lapu8g01768 857 SUPERFAMILY Voltage-gated potassium channels 105 357 - -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat region circular profile. 608 640 - -
Lapu8g01768 857 Pfam KHA, dimerisation domain of potassium ion channel 783 852 IPR021789 -
Lapu8g01768 857 Gene3D - 114 358 - -
Lapu8g01768 857 ProSiteProfiles KHA domain profile. 784 857 IPR021789 -
Lapu8g01768 857 SMART ANK_2a 671 701 IPR002110 GO:0005515
Lapu8g01768 857 SMART ANK_2a 608 637 IPR002110 GO:0005515
Lapu8g01768 857 SMART ANK_2a 641 670 IPR002110 GO:0005515
Lapu8g01768 857 SMART ANK_2a 575 604 IPR002110 GO:0005515
Lapu8g01768 857 SMART ANK_2a 738 767 IPR002110 GO:0005515
Lapu8g01768 857 SMART ANK_2a 705 734 IPR002110 GO:0005515
Lapu8g01768 857 Gene3D Helix hairpin bin 359 415 - -
Lapu8g01768 857 SUPERFAMILY cAMP-binding domain-like 360 549 IPR018490 -
Lapu8g01768 857 FunFam Potassium channel SKOR 112 357 - -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat profile. 641 673 IPR002110 GO:0005515
Lapu8g01768 857 CDD CAP_ED 432 546 IPR000595 -
Lapu8g01768 857 SUPERFAMILY Ankyrin repeat 580 760 IPR036770 -
Lapu8g01768 857 SMART cnmp_10 432 550 IPR000595 -
Lapu8g01768 857 FunFam Gated outwardly-rectifying K+ channel 647 773 - -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat profile. 608 640 IPR002110 GO:0005515
Lapu8g01768 857 Pfam Cyclic nucleotide-binding domain 452 536 IPR000595 -
Lapu8g01768 857 Pfam Ankyrin repeats (3 copies) 583 671 IPR002110 GO:0005515
Lapu8g01768 857 Pfam Ankyrin repeats (3 copies) 678 758 IPR002110 GO:0005515
Lapu8g01768 857 Pfam Ion transport protein 112 357 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu8g01768 857 Gene3D Jelly Rolls 416 553 IPR014710 -
Lapu8g01768 857 PRINTS EAG/ELK/ERG potassium channel family signature 147 157 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu8g01768 857 PRINTS EAG/ELK/ERG potassium channel family signature 304 321 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu8g01768 857 PRINTS EAG/ELK/ERG potassium channel family signature 348 357 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu8g01768 857 PRINTS EAG/ELK/ERG potassium channel family signature 256 266 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu8g01768 857 MobiDBLite consensus disorder prediction 20 49 - -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat region circular profile. 641 672 - -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat profile. 705 737 IPR002110 GO:0005515
Lapu8g01768 857 Gene3D - 565 673 IPR036770 -
Lapu8g01768 857 ProSiteProfiles Ankyrin repeat region circular profile. 705 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01768 Lapu-Chr8 34763979 34774806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01768 651 758 Ion Channels AT5G37500 31.387 3.39e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01768 K21867 - gmx:100814385 1560.04