Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01764 ATGGGAAGACAGAGTCCTGGAAACTGGATCAGAAACTTGCTTCTGAGGAAGAAATCGTCATCAAAGTCTAAGTCTTCCAGAGAGAAAGATATTTATAAACCTTCAACTAACAAGGATGTTCTGGTGGTGTCTTCGGAGACATCCGTGTCTTCTCCTATATCTGGTGCAAATGCTACTGAAGGAAAGCTATCAGAAAAGGAAGTAATTAGTAGTATATCATCAAATGATGGGGTAATTCTTGCAACTAGAGATGAACAGGCCAATGCACAATCTCTTGATAGTTTTTATTCTGAGGACCTCAATGAGAAAAGCAGGCTAATAGAAACAGCTATAACAATTCAGGCTGCTATTAGAGGCTATCAGGCGCGAGGGACAAATAAAACTCTAAAAGGTATCATTCCACTGCAAGCTTACATTCGTGGCCAGTTGGTTCGACGACAAGCTATTTCTGCTTTGTATTGTGTGAAGTCAATAGTTAGATTTCAAGCATTGGCCCGTGGTTACAAGGTTAGACACTCTGATATTGGCCTAGCAGTTCAGAAAACTTTTAAGGATACTAAATTGTGGAAATCTATTGGAGTAGTTACACCTACACAGGCAGTGAAGTTCTCGGATAATATCTTTATTCACAAGCTTCTGGCTTCATCACCCTCTGCTGTTTCTCCTCATCTCAAATATAATACTGGTGAACCTAACTTGGCTTGGGAATGGCTTGACCGTTGGACGAAATTACAATTTTGGGTACCTCTTCAAGAAGTGCAGAAATCTGATTCAGTGTCTGAAAAGCAAAATGGAAGTTCTCAAACTGTTGAAACTAACAAGGGACAAGTTAAAAGAAATGCTAGGAAAGCACCTGCTTTGAGGGTTGGTCATGATGATTTAGTCTCAGATTCCCACAAACATAAACGGTATCCAAAAAAGGATTCAAACCCCGCATTGCATTCAGCTAAGGAACATCCACTAAAGGAACTTGAGAAAAGGAGTTCAAAAAAATCTCAAATTCAGAATGTTTCTGATAAGTCCGAGGCTGCTAATGAGAAGAGAGCACACATCACTACAAAAGTTTCAGATCATACAAACATCAATGATGTTCCAGAGGAGGATGCTGGTGCTTCATCAGAGAAGATGAAATATTTGGCAGTGTCAAAGTCAGAAAAGTGTGATCTTGAGAAAAGTCCTGGACAGCAAGCACAAGAGCATGATAATAATGAGTCGTGTAATGGTACTAATTCTCCCTTGCAGCCTAGTTTGTTGAATAGTAAAGATGGAGGAGTCATTGAGGAGTTGAATAATGTGAAGTGTAAGAATTTCCAGAGAAGAGCTTCCCTGCCTGCTAATTTCACAGATCTTGAAAATGAAAATGTGTTGCATAATAATAACACTCCAAGACTTCCCAGTTATATGGCTCTCACTGAATCTACAAAAGCTAAGCTAAGAGGACAATGCTCTCCACGGTCTGTTAGTGATCTGGCAGATGTAAGTAGTATAACTCGGCGGCTTTCACTTTCATCTTCGCTTACTGGCAAGCTAGGTTCTTTCTCTCCACGATCAGATAGATTGGCTGCCTTGAACAAGATAAGGACTGATAGATCTCTATCATCTTCAAGGGATGGACCTAGTAAGAATTTAGGATTTTGCACCCTTTTCAACCATTCATGA 1659 0.3996 MGRQSPGNWIRNLLLRKKSSSKSKSSREKDIYKPSTNKDVLVVSSETSVSSPISGANATEGKLSEKEVISSISSNDGVILATRDEQANAQSLDSFYSEDLNEKSRLIETAITIQAAIRGYQARGTNKTLKGIIPLQAYIRGQLVRRQAISALYCVKSIVRFQALARGYKVRHSDIGLAVQKTFKDTKLWKSIGVVTPTQAVKFSDNIFIHKLLASSPSAVSPHLKYNTGEPNLAWEWLDRWTKLQFWVPLQEVQKSDSVSEKQNGSSQTVETNKGQVKRNARKAPALRVGHDDLVSDSHKHKRYPKKDSNPALHSAKEHPLKELEKRSSKKSQIQNVSDKSEAANEKRAHITTKVSDHTNINDVPEEDAGASSEKMKYLAVSKSEKCDLEKSPGQQAQEHDNNESCNGTNSPLQPSLLNSKDGGVIEELNNVKCKNFQRRASLPANFTDLENENVLHNNNTPRLPSYMALTESTKAKLRGQCSPRSVSDLADVSSITRRLSLSSSLTGKLGSFSPRSDRLAALNKIRTDRSLSSSRDGPSKNLGFCTLFNHS* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01764 552 MobiDBLite consensus disorder prediction 257 275 - -
Lapu8g01764 552 MobiDBLite consensus disorder prediction 21 35 - -
Lapu8g01764 552 SMART iq_5 153 175 IPR000048 GO:0005515
Lapu8g01764 552 SMART iq_5 127 149 IPR000048 GO:0005515
Lapu8g01764 552 SMART iq_5 105 123 IPR000048 GO:0005515
Lapu8g01764 552 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Lapu8g01764 552 PANTHER IQ-DOMAIN 5-RELATED 1 504 - -
Lapu8g01764 552 MobiDBLite consensus disorder prediction 285 333 - -
Lapu8g01764 552 MobiDBLite consensus disorder prediction 18 37 - -
Lapu8g01764 552 Pfam IQ calmodulin-binding motif 156 171 IPR000048 GO:0005515
Lapu8g01764 552 Pfam IQ calmodulin-binding motif 110 123 IPR000048 GO:0005515
Lapu8g01764 552 Pfam IQ calmodulin-binding motif 135 147 IPR000048 GO:0005515
Lapu8g01764 552 MobiDBLite consensus disorder prediction 257 421 - -
Lapu8g01764 552 MobiDBLite consensus disorder prediction 341 397 - -
Lapu8g01764 552 MobiDBLite consensus disorder prediction 398 418 - -
Lapu8g01764 552 Pfam Protein of unknown function (DUF4005) 458 522 IPR025064 -
Lapu8g01764 552 ProSiteProfiles IQ motif profile. 106 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01764 Lapu-Chr8 34694821 34700471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01764 1 537 IQD Protein Family AT1G14380 32.833 3.88e-55 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01764 - - vun:114179925 763.066