Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01756 ATGAAGTCTGCGTGGGTCAAAGAAGCGATTCTCTTCACTCTCCTATCGTGCGTCTTCGCCATTGTAGATTCGGATCTAGCTTCGGACAGAGCGGGGCTTGTGTCACTCCGAAGCGCGTTGGGGGGACGCACGTTGCTATGGAACACCACCCACACAACCCCTTGCTCGTGGACTGGCGTCACCTGCACCAACGACAGAGTAACCATGCTGCGCCTTCCCGCGATGGGCCTCTCCGGTTCGCTTCCCTCCGGTTTGGGAAACCTCACCCAACTGCAGACGCTCTCCCTCCGGTTCAACGCTCTAACCGGACGAATCCCCGCGGATTTTGTCAACCTCAAAGCGCTGCGGAACCTCTATCTCCAGGGAAACTTCTTCTCCGGCGAAGTTCCCGATGCCGTGTTCGCGTTGCAGAACCTCGTGAGGTTGAATTTAGGTAACAACAATTTCAGCGGCGAGATTTCGCCCAAGTTCAACGGTCTCACTCGTTTGTCCACTCTATATCTCGAACGCAACAATTTTACTGGTTCAATCCCTGACCTTAGTATTCCGCCTCTGGATCAGTTCAACGTCTCGTATAATTCCTTGACCGGTTCCATTCCGAACCGGTTTTCGCGTCTGAACCAAACCGCTTTTCTCGGAAATTCGCTTTGCGGGAAGCCCTTACAACCCTGCCCCGGAACCGAGGAGAGAAAGAATAAACTTTCCGGTGGTGCCATTGCGGGTATTGTGATTGGTTCCGTGTTTGGTGTGTTGTTGATTCTACTGCTTTTGTTCTTTTTGTGTAGAAAAAGGAGTGGGAAAAACCATGAAAGTGTGTCACCTGGGAAGCGTGATGTGGAAGGTGAAGTGTCTCGTGAAAAGAGTGTTGAGAGTGGGAATTCGGGTTCCGCAGTGGCAGGTTCGGTGGAGAAGAGCGAGGTTCAAAGTAGTGGTGGTGGGGATAAGAGTTTGGTGTTTTTTGGGAATGTGAATAGAGTGTTTAGTTTGGATGAGTTGTTGAGGGCTTCTGCGGAAGTGCTGGGGAAAGGAACGTTTGGAACGACTTATAAGGCGACTTTGGAGATGGGGGTGAGTGTGGCGGTGAAGAGGTTGAAGGATGTTACTGCCTCAGAGAGGGAATTCAGGGAGAAGATTGAACAAGTGGGGAAGATGGTTCATCACAACTTGGTCCCACTAAGGGGTTATTACTTTAGCAGGGATGAGAAGCTTGTTGTCTATGATTACATGCCTATGGGAAGCTTATCTGCTCTCTTACATGGCTCAAATGGTGGGGTGGGGAGGACTCCACTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGTGCTGCTCGTGGGATTGCATACATTCATTCGCATGGCCCAACATCCTCTCATGGAAACATCAAGTCATCGAATATCCTTCTCACCAAATCTTTTGAAGCTCGTGTTTCTGACTTTGGCCTTGCTTACCTTGCTCTTCCAACCTCTACGCCAAACCGTGTTTCTGGTTACCGAGCACCAGAGATCACTGACGCGCGCAAAGTTTCCCAAAAAGCTGATGTCTACAGCTTTGGTATCATGCTTTTGGAGCTGCTTACAGGGAAGGCTCCTGCTCATTCTTCACTGAATGAAGAAGGGGTGGACCTCCCAAGATGGGTTCAATCTGTCGTTCAAGGAGAGTGGAATACTGATGTATTTGACATGGAGCTTCTAAGGTACCAGAGTGTTGAGGAGGAAATGGTCAAGCTCTTGCAGCTTGCCCTTGAATGCACTGCCCAATATCCTGACAAGAGACCTTCAATGGACGTGGTGGCTAGCAAGATTGAGGAAATTTGCCATCCTAGTTTAGAGAAAGAGGAAGGAAAGAATCATGATTTTAAAGATGCTGATAATGGATTTTCCCAACAATACTACTCTGTTGACTCGGGTGTGTCACAAGCTTGA 1923 0.4935 MKSAWVKEAILFTLLSCVFAIVDSDLASDRAGLVSLRSALGGRTLLWNTTHTTPCSWTGVTCTNDRVTMLRLPAMGLSGSLPSGLGNLTQLQTLSLRFNALTGRIPADFVNLKALRNLYLQGNFFSGEVPDAVFALQNLVRLNLGNNNFSGEISPKFNGLTRLSTLYLERNNFTGSIPDLSIPPLDQFNVSYNSLTGSIPNRFSRLNQTAFLGNSLCGKPLQPCPGTEERKNKLSGGAIAGIVIGSVFGVLLILLLLFFLCRKRSGKNHESVSPGKRDVEGEVSREKSVESGNSGSAVAGSVEKSEVQSSGGGDKSLVFFGNVNRVFSLDELLRASAEVLGKGTFGTTYKATLEMGVSVAVKRLKDVTASEREFREKIEQVGKMVHHNLVPLRGYYFSRDEKLVVYDYMPMGSLSALLHGSNGGVGRTPLNWETRSAIALGAARGIAYIHSHGPTSSHGNIKSSNILLTKSFEARVSDFGLAYLALPTSTPNRVSGYRAPEITDARKVSQKADVYSFGIMLLELLTGKAPAHSSLNEEGVDLPRWVQSVVQGEWNTDVFDMELLRYQSVEEEMVKLLQLALECTAQYPDKRPSMDVVASKIEEICHPSLEKEEGKNHDFKDADNGFSQQYYSVDSGVSQA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01756 640 Gene3D Phosphorylase Kinase; domain 1 302 408 - -
Lapu8g01756 640 MobiDBLite consensus disorder prediction 267 311 - -
Lapu8g01756 640 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Lapu8g01756 640 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01756 640 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Lapu8g01756 640 MobiDBLite consensus disorder prediction 267 287 - -
Lapu8g01756 640 FunFam pollen receptor-like kinase 1 303 408 - -
Lapu8g01756 640 Gene3D Ribonuclease Inhibitor 28 182 IPR032675 -
Lapu8g01756 640 FunFam Probable inactive receptor kinase At1g48480 409 612 - -
Lapu8g01756 640 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Lapu8g01756 640 Pfam Protein kinase domain 337 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu8g01756 640 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Lapu8g01756 640 PANTHER OS05G0588300 PROTEIN 11 608 - -
Lapu8g01756 640 SUPERFAMILY L domain-like 44 209 - -
Lapu8g01756 640 MobiDBLite consensus disorder prediction 288 311 - -
Lapu8g01756 640 Gene3D Transferase(Phosphotransferase) domain 1 409 628 - -
Lapu8g01756 640 CDD STKc_IRAK 340 604 - -
Lapu8g01756 640 SUPERFAMILY Protein kinase-like (PK-like) 338 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01756 Lapu-Chr8 34613595 34617249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01756 25 604 Receptor kinase-like Gene Family AT1G48480 58.211 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu8g01756 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01756 - - gmx:100801103 1048.11