Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01732 ATGGCACTCTCTTTGACATCTCGTGGGGTCAATGAGTACCAAAAATGTGGGGTGGAAGAGGAAGATGGCTCACAGAGTCCTAATGGACTCAGCAATGATTCAGCATCAGCCATAACTCAATGTCTGATTAATTTCAAAGCCAATGAGTTCAGCAACCTCATGCAAGGTAGTGAGTCTTTTCTTAGCTTTCAGCAGAGTTGGCTGTTTTCCAAAGAGAGTAATTTGCATGAAGGTTGTAACCAATGGAACCATGTCAGTCCCAAAAACACCACAGACATGCGCCTAGTCCAAAATTTCAGTTGCTCTGAAACTGCTACTTGCTATAGCTCCATATTCAATGGTGCAAAAGAGAGGCAACATGGCCAAAGTTCATCTTCTGGGTGGCTATACTCAGAACCAAATGTCCCTAGTGATAGCCTGAATGAGTCAGCAGCACAAGAATTGGTCTTGAGAAAGCGCTCTTTTATGGAAGAGAACATGCAAACTGCCAATGCCAAGAAGCCATGCACAACTGCAAGTAAAGCAACAAAACCAAAGTCAAGCCCATTCAAGGATCCTCAAAGTGTTGCTGCCAAGAATAGAAGAGAGAGAATAAGTGAGCGGCTTAAAATACTCCAAGAACTGGTCCCCAACGGCTCCAAGGTTGATTTGGTGACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGTTGGCAGCTGATGAATTTTGGCCTGTCCAAGGTGGAAAAGCCCCTGACATTTCACAAGTAAGACAAGCCATTGATGCCATTATTTCATCTCAAAGATGA 810 0.4346 MALSLTSRGVNEYQKCGVEEEDGSQSPNGLSNDSASAITQCLINFKANEFSNLMQGSESFLSFQQSWLFSKESNLHEGCNQWNHVSPKNTTDMRLVQNFSCSETATCYSSIFNGAKERQHGQSSSSGWLYSEPNVPSDSLNESAAQELVLRKRSFMEENMQTANAKKPCTTASKATKPKSSPFKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDISQVRQAIDAIISSQR* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01732 269 MobiDBLite consensus disorder prediction 162 187 - -
Lapu8g01732 269 Pfam Helix-loop-helix DNA-binding domain 192 232 IPR011598 GO:0046983
Lapu8g01732 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 180 241 IPR036638 GO:0046983
Lapu8g01732 269 MobiDBLite consensus disorder prediction 162 192 - -
Lapu8g01732 269 CDD bHLH_AtIND_like 184 245 - -
Lapu8g01732 269 SMART finulus 188 237 IPR011598 GO:0046983
Lapu8g01732 269 FunFam Transcription factor bHLH83 180 239 - -
Lapu8g01732 269 Gene3D - 179 239 IPR036638 GO:0046983
Lapu8g01732 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 182 231 IPR011598 GO:0046983
Lapu8g01732 269 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 24 239 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01732 Lapu-Chr8 34355529 34356918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01732 72 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 52.427 3.43e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu8g01732 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01732 - - vra:106764568 466.463