LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu8g01730	ATGCCTACCAAAGCTGAAGGTACTCATGAAGAAGATATAATGTCAATTATGGAAGAGGGTGTTTCCCCTAGCCCTTCCAGAACCTTTGAATTGCATCACTGTTGTTCAAGCCATGTTGCAACCTTGGTTCAGAAAGTGATAGCAGAAGTTATTGGCACATATTTTGTGGTATTTGCTGGTTGTGGATCTGTGGCAGTGAATAAGATCTATGGCTCAGTCACATTTCCGGGCATTTGTGTGACATGGGGGCTGATTGTAATGGTCATGATTTACACCGTTGGTCATATCTCTGGAGCACACTTTAATCCTGCAATCACCATCACTTTGGCCATCTTTCGCCGCTTCTCATATAAACAGGTGCCACTGTATATTTTTGCACAGTTACTGGGATCTATACTTGCAAGTGGTACATTAGCCCTAATGTTGGATGTGACACCTAAAACTTTCTTTGGAACGGTACCAGTTGGATCCAGTGGCCAGTCTTTAGCCTGA	492	0.4329	MPTKAEGTHEEDIMSIMEEGVSPSPSRTFELHHCCSSHVATLVQKVIAEVIGTYFVVFAGCGSVAVNKIYGSVTFPGICVTWGLIVMVMIYTVGHISGAHFNPAITITLAIFRRFSYKQVPLYIFAQLLGSILASGTLALMLDVTPKTFFGTVPVGSSGQSLA*	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu8g01730	163	PRINTS	Major intrinsic protein family signature	82	106	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lapu8g01730	163	PRINTS	Major intrinsic protein family signature	44	63	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lapu8g01730	163	PRINTS	Major intrinsic protein family signature	119	138	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lapu8g01730	163	Pfam	Major intrinsic protein	40	143	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Lapu8g01730	163	Gene3D	Glycerol uptake facilitator protein.	5	163	IPR023271	-
	Lapu8g01730	163	PANTHER	AQUAPORIN NIP2-1	26	162	IPR034294	-
	Lapu8g01730	163	ProSitePatterns	MIP family signature.	100	108	IPR022357	-
	Lapu8g01730	163	SUPERFAMILY	Aquaporin-like	41	149	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu8g01730	Lapu-Chr8	34338631	34339663	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu8g01730	10	162	Major Intrinsic Protein MIP	AT5G37820	61.688	4.66e-63	194

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu8g01730	K09874		-	gmx:100791338	265.003