Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01729 ATGACAGAGCGGCCTGTATCAGGAGCTTCCATGAACCCTGCAAGAAGTATTGGTCCTGCCCTTATGATACATGTTTACAAAGGGTTGTGGATATACATAATTGGTCCAATTATTGGAGCCATAGCTGGAGCACTTGCCTATAACTTTCTTAGATCCACAGACATGTCACCTTCAGAAGAAACCAGTGTCTCCTTGAGAAACGGTGAATAG 210 0.4381 MTERPVSGASMNPARSIGPALMIHVYKGLWIYIIGPIIGAIAGALAYNFLRSTDMSPSEETSVSLRNGE* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01729 69 SUPERFAMILY Aquaporin-like 4 56 IPR023271 -
Lapu8g01729 69 PANTHER AQUAPORIN NIP2-1 3 58 IPR034294 -
Lapu8g01729 69 Gene3D Glycerol uptake facilitator protein. 1 63 IPR023271 -
Lapu8g01729 69 Pfam Major intrinsic protein 4 47 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01729 Lapu-Chr8 34337704 34338580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01729 5 61 Major Intrinsic Protein MIP AT5G37820 57.895 6.81e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01729 K09874 - gmx:100791338 81.2629