Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01725 ATGAGAAAACCTTGTTGTGACAAAGAAAACATCAATAAAGGAGCTTGGTCTAAGCAAGAAGACCAAAAGCTCATTGACTACATCAGAGTTCATGGTGAAGGTTGTTGGCGTTCCATTCCCAAAGCCGCTGGGCTGCATCGTTGTGGAAAAAGCTGTAGGCTGAGATGGTTAAACTACTTACGACCAGATATCAAACGTGGAATCTTTGCCGAAGATGAAGAAGACCTCATCATCAAACTCCATGCCCTCCTCGGTAACAGGTGGTCACTCATTGCTGGAAGATTGCCTGGAAGAACAGACAATGAGGTGAAGAACTATTGGAATTCTCACATCCGCAGAAAACTGATAAAGATGGGAATTGATCCAAATAACCATAAGCCACACCAAAGCTTTTCTCGTCCTCATGCTTCTTCTGCTGAGGGTGCATCAACATCTGAGTCCATGAACAAAGACCAGAAAGTCCCTATCTTCAAATCCCGAGTTGCTTCCACTCATCATAGGATTTCCTTCACAGAAGAAGAATCAGCAATTATTTCGTCACCCACTTTGAATCTTGACCTAACAATTGCTTTACCTTCGTCTATGATTGGTGATTTGGAAGACAAGCCAGTAAAAAATTCCGAGTCAACCAAGACAGTGGACATGGAAATAGATCTCAACTGTTAG 666 0.4264 MRKPCCDKENINKGAWSKQEDQKLIDYIRVHGEGCWRSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKPHQSFSRPHASSAEGASTSESMNKDQKVPIFKSRVASTHHRISFTEEESAIISSPTLNLDLTIALPSSMIGDLEDKPVKNSESTKTVDMEIDLNC* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01725 221 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Lapu8g01725 221 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Lapu8g01725 221 Gene3D - 13 65 - -
Lapu8g01725 221 Gene3D - 68 142 - -
Lapu8g01725 221 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lapu8g01725 221 CDD SANT 71 111 IPR001005 -
Lapu8g01725 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Lapu8g01725 221 MobiDBLite consensus disorder prediction 125 151 - -
Lapu8g01725 221 CDD SANT 15 60 IPR001005 -
Lapu8g01725 221 MobiDBLite consensus disorder prediction 122 151 - -
Lapu8g01725 221 SMART sant 65 113 IPR001005 -
Lapu8g01725 221 SMART sant 12 62 IPR001005 -
Lapu8g01725 221 FunFam Transcription repressor MYB4 68 134 - -
Lapu8g01725 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Lapu8g01725 221 FunFam MYB-related transcription factor 12 65 - -
Lapu8g01725 221 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Lapu8g01725 221 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 163 - -
Lapu8g01725 221 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01725 Lapu-Chr8 34308448 34310937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01725 2 192 MYB Transcription Factor Family AT4G38620 55.769 2.81e-77 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu8g01725 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01725 K09422 - gmx:100306391 364.77