Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01700 ATGGCTTCAAGCTCCCACAACAACAACAACAACAACAAGGAAAACTCTTCTTCCTGGACACGCATGCAGAACAAGCAATTCGAAAGTGCACTTGCCTTGTATGATCAAGACACCCCAGATCGATGGCAAAACATAGCCAGAATAGTTGGTGATAAATCTGCTGAGGAAGTTAAGAGACACTATGAAATCCTTGTGGAAGACCTTAGGCATATAGAATCTGGACGTGTTCCAATTCCCAGCTACAAGTCCAATGATGATCGTAATAATGAAGAGAGGTAA 279 0.4229 MASSSHNNNNNNKENSSSWTRMQNKQFESALALYDQDTPDRWQNIARIVGDKSAEEVKRHYEILVEDLRHIESGRVPIPSYKSNDDRNNEER* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01700 92 ProSiteProfiles Myb-like domain profile. 11 65 IPR001005 -
Lapu8g01700 92 Gene3D - 10 78 - -
Lapu8g01700 92 CDD SANT 19 61 IPR001005 -
Lapu8g01700 92 MobiDBLite consensus disorder prediction 1 23 - -
Lapu8g01700 92 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Lapu8g01700 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 6 88 IPR044636 GO:0003700
Lapu8g01700 92 SMART sant 15 67 IPR001005 -
Lapu8g01700 92 FunFam Transcription factor SRM1 11 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01700 Lapu-Chr8 34072154 34072452 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu8g01700 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01700 - - pvu:PHAVU_008G192200g 163.31