Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01697 ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCTCGAGCGATTGTGTATTTGCTCCATACTTTTCCTACGACCAAGCTTCAACCCATTTTGCAGCAGTGCATAAGATTTATGGAGCTAGTAACGTCTCCAAGCTATTGTCACATCTTCCAATCCAGAATAGAAGAGATGCTGCCATCACCATATCTTACGAAGCCTTGGCTCGCATGCATGATCCTATTTATGGCTGTGTTGCTCATATCTATGCATTGCAGCAACAGGTTGCCAACTTGCAAGAGGAGATAGATGCTCTTGGAAGCATAGTGTCAAATTCCACAGTTAGTGTTGTGAATTGTGGCACTGTCCAAGCACCAATAAACTCAGAGAACGGAATACCTTATGATATTTTGCAGCATGATGCTACAAGGACACAGTATTTTGAAAATAATCTGGCTAACTTTCTATCACAAGAAGGAAGTGCCACAGTGTACCAAAGTTTCGACTCACAGATGAATATAGAGCTTCCTAATGCACACGTGGAAGAAGCTTCATTTGGTGATTCCAACTCCAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGGTCTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAAGAGCTAG 657 0.4231 MTGFGSSCGACKFLRRKCSSDCVFAPYFSYDQASTHFAAVHKIYGASNVSKLLSHLPIQNRRDAAITISYEALARMHDPIYGCVAHIYALQQQVANLQEEIDALGSIVSNSTVSVVNCGTVQAPINSENGIPYDILQHDATRTQYFENNLANFLSQEGSATVYQSFDSQMNIELPNAHVEEASFGDSNSNPLEQFLSGIDQEVFVNHPWFKHNADIKS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01697 218 Coils Coil 87 107 - -
Lapu8g01697 218 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Lapu8g01697 218 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Lapu8g01697 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01697 Lapu-Chr8 34046005 34046986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01697 1 152 AS2 family AT5G06080 58.553 8.98e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu8g01697 LOB 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01697 K13945 - gmx:100787638 333.183