Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01696 ATGGCCAACCGTTGGTGGACCGGGAACGTGGCGGTGAGACCCAATGAGCCCAACTCATCGCTTCAGCCGAGAGAGCAAGACAACGGCGACAACGCTACTCCGACCAACAGCGGCAACAGTAACACCAACCTCAACGCGGGCGAGGACGACGACAACCCCGCCAACAACAACGATGGCGACGACCAGAACCTGAGCAGCGGGAGACGGCCGAGGGGCAGGCCGCCGGGGTCCAAGAACAAGCCGAAGCCACCGGTGGTTATAACGAAGGAGAGCCCCAACGCGCTGCGCAGCCACATCCTCGAAATCAGCGGCGGCAGCGACGTGGCGGAGTGCATTGCCACCTTCGCCACTCGCCGCCATCGCGGCGTGTCTGTGCTCAGCGGCAGCGGCGTTGTCACCAACGTCACGCTCCGCCAGCCCGCTGCGCCAGGTGGCGTCATCACGCTGCAGGGGAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTCTGCCAGCGCCGTCCCCTCCGGAGGCTACCGGACTAACCGTGTACCTCGCCGGTGGGCAGGGGCAGGTCGTTGGCGGCAGCGTGGTGGGGCCCCTGGTCGCGTCGGGACCCGTGATGGTGGTGGCTGCCACCTTCGCTAATGCTACCTACGAGAGGTTGCCCTTGGAGGACGAACAAGGGGAAGAGGACATGCAAGAGGTGAATGAAGGTGGTGGTGGTGGAACACCACCACCTTCTCAGGGTGATCAACAGCAACAAGTTCCAATGCCGGTGTATAATGTGGTGCCTAACAATGGTGACGTGTTCTGGGGTCCTCCACCTCGTCCTCCTCCTCCACCTTCTAATTATTGA 837 0.6272 MANRWWTGNVAVRPNEPNSSLQPREQDNGDNATPTNSGNSNTNLNAGEDDDNPANNNDGDDQNLSSGRRPRGRPPGSKNKPKPPVVITKESPNALRSHILEISGGSDVAECIATFATRRHRGVSVLSGSGVVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLVASGPVMVVAATFANATYERLPLEDEQGEEDMQEVNEGGGGGTPPPSQGDQQQQVPMPVYNVVPNNGDVFWGPPPRPPPPPSNY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01696 278 FunFam AT-hook motif nuclear-localized protein 95 223 - -
Lapu8g01696 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 220 - -
Lapu8g01696 278 PIRSF ESCAROLA 9 267 IPR014476 GO:0003680
Lapu8g01696 278 ProSiteProfiles PPC domain profile profile. 92 230 IPR005175 -
Lapu8g01696 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 266 IPR014476 GO:0003680
Lapu8g01696 278 MobiDBLite consensus disorder prediction 239 254 - -
Lapu8g01696 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 208 IPR005175 -
Lapu8g01696 278 CDD DUF296 96 179 IPR005175 -
Lapu8g01696 278 Gene3D - 95 228 - -
Lapu8g01696 278 MobiDBLite consensus disorder prediction 264 278 - -
Lapu8g01696 278 MobiDBLite consensus disorder prediction 215 278 - -
Lapu8g01696 278 MobiDBLite consensus disorder prediction 12 63 - -
Lapu8g01696 278 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01696 Lapu-Chr8 34033724 34035579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01696 1 239 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 57.741 5.23e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01696 - - aprc:113874473 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu8g01696 8 34033724 34035579 Lapu8g01696 8 34033724 34035579 ECH