Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01694 ATGGACAGTTGGAGAAATATTCTTGTTTGCATTCTAAGATTACACAAGTTAGGTCTTCTTCCTGCCCGTGTGGTCAGTGATGCAGCTGATGAACAGAGCCTTCTGCTGAAACTGGGTATGGAAAGCCTTTGCAAATTCTTTATTAATAGCTCAAAGGCCACCTATTGGAGATCCTCAGGGTTGATGGGCAGCATATTCACTGGGTGTAAAGTTCTGAAAGCTGAATCTTTATTGCAACTTGCAAGAGCACCCATTTGGGCTGCAGGTCGACCTCAGAAAGGGAACAACACTCCTGAAGATGAAGATACAGCAGTTTTCTTCCCTGAGTTGCTGATTGCAATTTCTTTGAACAACAGGGATATAACTGTTCTTCTTCCGCACAGTGTGTATGAGCATGTATCCAATATAGTTCACTCAACTGTAATGCCTTGTGCTCTGCTTTATGGCCAGGTTGCTGATGCATACTGTGAGCAGACTATGCAGGAAGTCAGTCACCTTGTAAAGGCAAATGCTTCTCATATCAGATATCGGTTAGACTCTTCTAGGCAATTTGCTGAATCCTTGGTTGAACAGACAGAGCGATCTGTACTGGCACTATATTTCATGGCATGGTATGTCAATTATTTGGTACAATGGACTACTGATGCTAAGGAAGCAATGGAGCAGGAGCAAGTGTCTGGGTTGTACCAGGATATTGGAGAGATGTGGTTGAGGCTTGTACAGAGAATAAGGAAAATCATTTATGATTTGAAGCAGAACCAAATGTGCACCACTACAATTCAAGATGTTGCTTCAAGGGCAGAACAGAGTCGCTTGTGGCTATTGTTTGCTGCTTCCGGGTTGGTTTGGAATTACTGGATGTATGTGAGGAGAGAACAAATGATGAAGTCACACTCACACCTTCTTCATAAAGCACCAATTATGGGAGATGACAGAAAGAACAATTGGGAAGAAAGGGCTTTTGCTGAAGATGCAGCTAGGATTCTTGGTGGGAGCATGTGGCCTCCAAGATCTTACTCTTGCACCTTTTGTAAGAGAGAGTTCAGGTCTGCTCAAGCTCTTGGAGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAAAATCCTAGCCCTCATCACAATTATGAACCCTTTCATCACCATCATGAAAATGATGATCGCATCAAATCCTTATCAGGTAATAATCATCATTTTTCTGCACCAGGGATCTCCACCCAGATAAATTGTGGTCTTACTCATGCTCATAACTATTCTAGCCAAGCAACTACAATTTCAACAACCAGATCACTCTCATGTATATCCAAACAAGAAAACTGTGGTCAGCAGCATAAATTTTCACCTTCTTCTTCAAGTATCTTGGGACATATGGGGTCTCTTGATTCAGAACAAGAAGGGGTGGTCAAAGGAAAGGAGTACAATTTTAAAGGCTTGGGATGTAGCAATTATGTTGAAACAAGTTTGTCTGTGGGTCTGACTTCCATGTTTGGCCAAAATTCATCAGCAACCGTTCCTTGTGGTGACAGATCCAACATCAGTTGCAAGAGACTAAAGACTGGCATTTCTTCTCTTCCTCTCTTACTCAGACCATGTTCAAAGGACAAAGGCCTGGCTTTTCAACCTGTGGAAATCTCTCTTGGACTTGATCATGGAATGGAAGATGTGGATCTTGAGCTCAGGCTAGGGAAACAACACAAAGTTAAGTAG 1713 0.4262 MDSWRNILVCILRLHKLGLLPARVVSDAADEQSLLLKLGMESLCKFFINSSKATYWRSSGLMGSIFTGCKVLKAESLLQLARAPIWAAGRPQKGNNTPEDEDTAVFFPELLIAISLNNRDITVLLPHSVYEHVSNIVHSTVMPCALLYGQVADAYCEQTMQEVSHLVKANASHIRYRLDSSRQFAESLVEQTERSVLALYFMAWYVNYLVQWTTDAKEAMEQEQVSGLYQDIGEMWLRLVQRIRKIIYDLKQNQMCTTTIQDVASRAEQSRLWLLFAASGLVWNYWMYVRREQMMKSHSHLLHKAPIMGDDRKNNWEERAFAEDAARILGGSMWPPRSYSCTFCKREFRSAQALGGHMNIHRRDRARLKQNPSPHHNYEPFHHHHENDDRIKSLSGNNHHFSAPGISTQINCGLTHAHNYSSQATTISTTRSLSCISKQENCGQQHKFSPSSSSILGHMGSLDSEQEGVVKGKEYNFKGLGCSNYVETSLSVGLTSMFGQNSSATVPCGDRSNISCKRLKTGISSLPLLLRPCSKDKGLAFQPVEISLGLDHGMEDVDLELRLGKQHKVK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01694 570 ProSitePatterns Zinc finger C2H2 type domain signature. 341 361 IPR013087 -
Lapu8g01694 570 MobiDBLite consensus disorder prediction 369 388 - -
Lapu8g01694 570 SUPERFAMILY beta-beta-alpha zinc fingers 336 365 IPR036236 -
Lapu8g01694 570 Gene3D Classic Zinc Finger 335 393 - -
Lapu8g01694 570 PANTHER OS07G0101800 PROTEIN 310 566 - -
Lapu8g01694 570 Pfam C2H2-type zinc finger 339 362 - -
Lapu8g01694 570 ProSiteProfiles Zinc finger C2H2 type domain profile. 339 366 IPR013087 -
Lapu8g01694 570 SMART c2h2final6 339 361 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01694 Lapu-Chr8 33995495 34002525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01694 311 395 C2H2 Transcription Factor Family AT2G37740 55.056 3.41e-25 104