Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01693 ATGGCTGGGATTTGTTGCGGCGTTGTTGGAGAGGCCGGAGAGACTCCTTCTCCGACCAAACCTACTTCGCGCCCTTTCGCTCGCCGAAGTTTGGACCAACTGCCTATCAAATACATCGCCGGCGTGGCAATCCCGGCGCCGGAGAACCCTCGGAAGCGCCAGAAGCTGGATCAGCGCGCTTCTCCGGCGCGGGAGTGTGAGAATGCGGTTCAGAGTTCTGAATCAAAGGTAGTCGAGGCTGTCTCGCTTCCGAATTGTTCGAAGCTTCCGACGTTGGACTCGAAAACGGTTGTAGTCGAGGAGGAGTGTCCGAGGTATGGGGTAACCTCGGTTTGTGGCAGGAGGAGGGAGATGGAAGACGCCGTTTCCGTGCATCCTTCGTTTTGTCTCCAAAGTGGCGATGAAGATAAGAAAGGGTTTCATTTCTTCGCTGTTTTTGACGGCCACGGATGCTCACACGTGGCGACTATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAGGAGATTCAAAAAGCGAAAGAGAATTTGGAATGGGAATCGATGATGAAGAAGAGTTTCGCTCGAATGGACGAAGAGGTCCAAAGGTGGAGCAGAACCAACGAGACACGCACTTGCAGGTGCGAGCTTCAGACCCCACGCTGCGACGCCGTTGGCTCCACCGCGGTGGTCGCCGTCGTCACGCCGGAAAAGATAATTGTCGCCAACTGTGGCGACTCACGCGCCGTGCTCTGCCGGAACAGCGCACCCGTACCACTCTCTGATGACCACAAGCCGGATCGACCCGACGAGTTGCTTCGGATCCAAGACGCGGGTGGGCGCGTGATATATTGGGACGGGCCTAGAGTGCTTGGGGTCTTGGCCATGTCAAGAGCTATAGGGGACAACTATTTAAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACGGAGCGAAGTGAGGAGGATGAGTGTTTGATACTAGGGAGTGACGGGCTTTGGGACACGGTGCAAAACGACACCGCATGTAAGGTGGCGCGTATGTGTCTGAACGCCCAGAAGGCGGCGTCTCTGGGGAGGGAGTCGACGGTGGAGTGCTCCGACAAGGCGTGCTCCGACGCCTCCATTCTGCTGACTAAGTTGGCGTTGGTGAGGCACAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGGGAGATGATCGTCAACAATAA 1200 0.5583 MAGICCGVVGEAGETPSPTKPTSRPFARRSLDQLPIKYIAGVAIPAPENPRKRQKLDQRASPARECENAVQSSESKVVEAVSLPNCSKLPTLDSKTVVVEEECPRYGVTSVCGRRREMEDAVSVHPSFCLQSGDEDKKGFHFFAVFDGHGCSHVATMCKERLHEIVKEEIQKAKENLEWESMMKKSFARMDEEVQRWSRTNETRTCRCELQTPRCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNSAPVPLSDDHKPDRPDELLRIQDAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLILGSDGLWDTVQNDTACKVARMCLNAQKAASLGRESTVECSDKACSDASILLTKLALVRHSSDNVSVVVVDLRGDDRQQ* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01693 399 MobiDBLite consensus disorder prediction 9 29 - -
Lapu8g01693 399 ProSiteProfiles PPM-type phosphatase domain profile. 105 392 IPR001932 -
Lapu8g01693 399 SMART PP2C_4 95 390 IPR001932 -
Lapu8g01693 399 Gene3D - 92 399 IPR036457 -
Lapu8g01693 399 PANTHER PROTEIN PHOSPHATASE 71 392 IPR015655 GO:0004722|GO:0006470
Lapu8g01693 399 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Lapu8g01693 399 CDD PP2Cc 105 367 IPR001932 -
Lapu8g01693 399 MobiDBLite consensus disorder prediction 45 68 - -
Lapu8g01693 399 FunFam Protein phosphatase 2C 37 100 399 - -
Lapu8g01693 399 SUPERFAMILY PP2C-like 90 393 IPR036457 -
Lapu8g01693 399 Pfam Protein phosphatase 2C 105 359 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01693 Lapu-Chr8 33979943 33982522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01693 95 393 PP2C-type Phosphatase Gene Family AT1G07430 63.804 1.06e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01693 K14497 - gmx:100781388 608.986