Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01673 ATGATAGCTGCTGCAAGCGATGCAATATATGCGAATGGAGCTGCATGTGGTCAAATGTACAAGATATCGTGCACAGGTGCTACCAACCAAGGTGTGCCTCAGCCATGCAAGGGTGGCAGTGTTACGGTCAAGATTGTTGATCGTTGCCCTTCCCCAGGTTGCCAATCCACCATTGATCTCTCCCAAGAAGCTTTCTCTGCAATCGCTGACCTCAATGCTGGAAAAATTCAAATTGAATACAACAAGTAA 249 0.4659 MIAAASDAIYANGAACGQMYKISCTGATNQGVPQPCKGGSVTVKIVDRCPSPGCQSTIDLSQEAFSAIADLNAGKIQIEYNK* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01673 82 Gene3D - 1 82 IPR036908 -
Lapu8g01673 82 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 82 IPR007112 -
Lapu8g01673 82 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 1 82 IPR044206 GO:0009627|GO:0048046
Lapu8g01673 82 Pfam Lytic transglycolase 3 80 IPR009009 -
Lapu8g01673 82 CDD DPBB_EG45-like 1 81 - -
Lapu8g01673 82 SMART dpbb_1 2 80 IPR007112 -
Lapu8g01673 82 SUPERFAMILY Barwin-like endoglucanases 1 81 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01673 1 82 Expansin Gene Family AT2G45110 33.333 2.02e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01673 - - csin:114316657 147.517