Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01672 ATGAAGTCTTTAGGCCTGTCGCATCTCCTCCAAATTCTTACATGCATTCTGCTTTTCACTCCCTCATTTTCTCAAGATGATAGAGAGATTTACATAGTTTACATGGGCGAATATCCAGAGGACGTGGAACTCACAGAATCACTTCACACTAGTATGATTCAAAGTGTCCTCGGCAGCAAATTTGCATCAGATACTTTGCTGCACAGCTACAAGAGTTTGAATGGATTTGTGGCGAGGCTAACCAAAGAAGAATCAGAAAGAATGAAAGGAATGGATGGTGTGGTTTCTGTTATTCCAAATGCAGTCCACAACATCCAAACATCAAGGTCCTGGAACTATCTTGGCTTCCCTGAAATTGTCCCAAGAAGATTAGATGTAGAAAGTCAAACAATCGTTGGAGTAATTGATAGTGGAATCTGGGCTAATTCCCCTAGCTTTACCGACCAAGGATTTGGTCCAGTACCCCAGAAATGGAAGGGAACATGCCATAACTTCACTTGCAATAAGAAAATAATTGGAGCAAAATATTTTCGCATTGGGGGTAACTTCAGCACACTGGACATCAGATCTCCAATCGATACGAATGGTCACGGGTCTCACTGTGCATCCATTGCTGCTGGAAACCTTGTTAGGAATGCAAGTCTGTTTGGGCTTGGCTTAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTATAAAGTTTGTTGGACACTGGGTTGTGAAACTGCTGACATTCTTGCAGGATTTGATGAAGCCGTTAGCGATGGTGTTGACATTCTTTCTGTCTCAGTGGGAATTCCTGCCAACCAACAAACCCCATATTTCCCATATTTTCAAGATATATTTGCAATAGGAGCTTTCCATGCAATGAAGAGAGGCATATTAACTTCTAAATCTGCAGACAATTCTGGTCCAGCGCCTTACTCAATGAGACATCTTGCACCCTGGTTCATTTCTGTGGCTGCCACCAATATAGACAGAAAGTTTTTCACCGATCTCCGACTGGGCAATGGCCAGACCTTCAAGGGAATTTCAGTAAATACATTTCCAACACAGACAGCTCACCCTTTAATTTATGGTGGAGATGCACCAGCTCCTGGATATAATAGTTCCGTATCCAGACTTTGCCATGAAAATACTTTGAATGGAGCTTTGGTGAGAGGGAGAATTGTTCTGTGTGATGGCTATTCTGGTCCTGCACAAGTGGGATTTGCTTCTGGGGCTGCGGGTGTTATATTCACAGGTACACCGCCTTTAGTTGTTCCAGATGTGTTTGCATTGCCAGCAATTCAGATCACCTTAAACGATGGGACGCTCGTATATTCTTATTTGAAGTCAGACAGGAATCCAACGGCTAGCATATCTAAGACTTACGAAGGAACAGATTCATCAGCCCCTTTCATTGCTCCTTTCTCATCAAGAGGTCCAAATAAGATCACTCCAGACCTTCTTAAGCCTGATATAGCAGCTCCAGGTGTTAGCATTCTGGCTGCATGGTCTGCAATTGCTCCTATTTCTGGTGTTAGTGGAGATAGTAGAGTATCGAGATTCAATATATTATCTGGAACTTCAATGGCATGCCCTCATGTTACTGCAGCAGCTGTTTACGTCAAATCATATCATCCAACCTGGTCTCCTGCTGTACTTAAATCCGCATTGATGACAACTGCTACCCCTATGAGACCTTCACTTAATTCGGATGCTGAATTTGCTTATGGCGCGGGGCAAATCAATCCTTTGAAGGCAGTGCATCCTGGGCTGGTTTATGAAGCTGGCGAAACTGATTATGTTAGTTTTCTGTGTGGACAAGGTTATACTACAGCATTGCTGCGACTAGTTACAAGAGATAACAGTGATTGTACATCAGCAAATAGGGGATCTGTTTTCTACCTTAATCTCCCTTCTTTTGTTCTGTCAACCGCTCTCTCAAGGAATAACAATGTCACTTTTGGTAGAACTGTTACAAATGTTGGATCAGCAACATCCAGATATAGGGCCATAATAAGTGCACATCCATCTTCTTTGAACATCCAAGTGGTGCCAAATGTTTTGGCCTTCTCATCTTTGGGTCAGAGGCTGCCCTTCGTCCTTACGATTCAAGGAAGCATTAATACAAAGTTAGTTTCTTTTTCTTTGACTTGGGATGATGGCCATTTTCAGGTAAGGAGCCCCGTTGTTGTTTATGTTCCATAA 2202 0.4296 MKSLGLSHLLQILTCILLFTPSFSQDDREIYIVYMGEYPEDVELTESLHTSMIQSVLGSKFASDTLLHSYKSLNGFVARLTKEESERMKGMDGVVSVIPNAVHNIQTSRSWNYLGFPEIVPRRLDVESQTIVGVIDSGIWANSPSFTDQGFGPVPQKWKGTCHNFTCNKKIIGAKYFRIGGNFSTLDIRSPIDTNGHGSHCASIAAGNLVRNASLFGLGLGTARGGVPSARIAVYKVCWTLGCETADILAGFDEAVSDGVDILSVSVGIPANQQTPYFPYFQDIFAIGAFHAMKRGILTSKSADNSGPAPYSMRHLAPWFISVAATNIDRKFFTDLRLGNGQTFKGISVNTFPTQTAHPLIYGGDAPAPGYNSSVSRLCHENTLNGALVRGRIVLCDGYSGPAQVGFASGAAGVIFTGTPPLVVPDVFALPAIQITLNDGTLVYSYLKSDRNPTASISKTYEGTDSSAPFIAPFSSRGPNKITPDLLKPDIAAPGVSILAAWSAIAPISGVSGDSRVSRFNILSGTSMACPHVTAAAVYVKSYHPTWSPAVLKSALMTTATPMRPSLNSDAEFAYGAGQINPLKAVHPGLVYEAGETDYVSFLCGQGYTTALLRLVTRDNSDCTSANRGSVFYLNLPSFVLSTALSRNNNVTFGRTVTNVGSATSRYRAIISAHPSSLNIQVVPNVLAFSSLGQRLPFVLTIQGSINTKLVSFSLTWDDGHFQVRSPVVVYVP* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01672 733 Pfam Fibronectin type-III domain 634 730 IPR041469 -
Lapu8g01672 733 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Lapu8g01672 733 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Lapu8g01672 733 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Lapu8g01672 733 CDD Peptidases_S8_3 103 561 IPR034197 -
Lapu8g01672 733 Gene3D - 603 732 - -
Lapu8g01672 733 Pfam Subtilase family 128 578 IPR000209 GO:0006508|GO:0008236
Lapu8g01672 733 CDD PA_subtilisin_like 335 457 - -
Lapu8g01672 733 ProSiteProfiles Serine proteases, subtilase domain profile. 110 586 - -
Lapu8g01672 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Lapu8g01672 733 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Lapu8g01672 733 Gene3D Peptidase S8/S53 domain 130 599 IPR036852 GO:0004252|GO:0006508
Lapu8g01672 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 730 IPR045051 -
Lapu8g01672 733 Pfam Peptidase inhibitor I9 31 102 IPR010259 -
Lapu8g01672 733 Gene3D - 329 464 - -
Lapu8g01672 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Lapu8g01672 733 SUPERFAMILY Subtilisin-like 116 587 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01672 Lapu-Chr8 33817673 33825749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01672 12 731 Subtilisin-like Serine Gene Family AT3G46850 44.892 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01672 - - vum:124828449 1069.68