Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01659 ATGTTGGTCACTACTGAGGACAAGTCTCATGTTGTTGTTGTTGACATACACAGTAATGGCTGTTGTCACCGGAGCTCGGCCGCCGGCGAGGGGTGTTCCGATGCCAGCGACCGGTCGCATGAGGAGCAAAGGTCTTCCCATGATCCTGGCACTGAGATTGTAGGAGTGTGTGAGAAGGAGAGAGAATCCTCTGCTTCAGAGTGTTCAGTGGAGGTGGATCTGGAGGAGGGTGCGGTACCCGAAGATAAGGTGCATTTGGATAATGTGGAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGACCAACCATGAATCTGGAACTCCCATTGAGCTGGGATGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAGCAGTGTGCCGAGGCTTGGTTCAAGATCAAGGGCAACAAAACATGTGAAATATGTGGATCAATTGCACGCAATGTAGCTGGAGCTATTGAAATTCAAATGACAGAACAATGGAATGAGGCCAATGATGGTTCCACGGCACCACCATCTGGAGCAGCAGCAGCGACAGAAACTAGAAATTTCTGGCAGGGTCACCGTTTTTTGAATTTCCTGCTAGCCTGTATGGTCTTTGCCTTTGTCATATCCTGGCTCTTTCACTTTAATGTACCCTCTTGA 651 0.49 MLVTTEDKSHVVVVDIHSNGCCHRSSAAGEGCSDASDRSHEEQRSSHDPGTEIVGVCEKERESSASECSVEVDLEEGAVPEDKVHLDNVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKQCAEAWFKIKGNKTCEICGSIARNVAGAIEIQMTEQWNEANDGSTAPPSGAAAATETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01659 216 ProSiteProfiles Zinc finger RING-CH-type profile. 85 151 IPR011016 GO:0008270
Lapu8g01659 216 MobiDBLite consensus disorder prediction 34 52 - -
Lapu8g01659 216 Pfam RING-variant domain 93 144 IPR011016 GO:0008270
Lapu8g01659 216 SMART ringv_2 92 145 IPR011016 GO:0008270
Lapu8g01659 216 PANTHER ZINC FINGER, RING-CH-TYPE 18 215 - -
Lapu8g01659 216 SUPERFAMILY RING/U-box 90 147 - -
Lapu8g01659 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 153 IPR013083 -
Lapu8g01659 216 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01659 Lapu-Chr8 33602696 33607279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01659 33 216 C3H Transcription Factor Family AT5G05830 63.978 8.64e-76 225