Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu8g01655 ATGCACATTCATGATCGTTTGTTTATGTTATCACCGTTTTTATCGTTTGCCAGACTTTACGTCAGGGGTTCAATTCTTGGATACAAGAGGTCCAAGTCAAATCAGTACCCAAATACTTCTCTCATCCAGATTGAGAATGTAAACTCCAAGGAAGAGGTTGCGTGGTACGCTGGGAAGCGCATGGCTTACATTTACAAAGCCAAGGTAAAGAAGAACGGAAGCCACTATCGATGCATTTGGGGTAAGGTCACCAGGCCTCATGGTAACAGTGGTGTCGTTAGAGCTAAGTTCAAGTCCAATCTGCCGCCAAAATCAATGGTAATTTTTTGA 330 0.4303 MHIHDRLFMLSPFLSFARLYVRGSILGYKRSKSNQYPNTSLIQIENVNSKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMVIF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu8g01655 109 Gene3D translation elongation factor selb, chain A, domain 4 13 108 IPR038661 -
Lapu8g01655 109 FunFam 60S ribosomal protein L35a 14 108 - -
Lapu8g01655 109 Pfam Ribosomal protein L35Ae 19 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lapu8g01655 109 ProSitePatterns Ribosomal protein L35Ae signature. 81 102 IPR018266 GO:0003735|GO:0005840|GO:0006412
Lapu8g01655 109 SUPERFAMILY Translation proteins 19 106 IPR009000 -
Lapu8g01655 109 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 21 109 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lapu8g01655 109 PANTHER 60S RIBOSOMAL PROTEIN L35A 17 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu8g01655 Lapu-Chr8 33561656 33564883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu8g01655 17 106 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.778 3.01e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu8g01655 K02917 - mof:131168367 182.57